Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0013812 through 18771 annotations produced 1 hits



dynein-related heavy chain polypeptide (Dhc93AB):

Annotation Number : CG3723
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013812
Gbrowse : chr3R:16850740-16868141 (-) // 100.0 //
Probeset : 1630304_at
Accessions : protein= NP_524424;, nucleotide= NM_079700;
Pathway : 0005858 // axonemal dynein complex // inferred from sequence or structural similarity /// 0005875 // microtubule associa
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from seq
FlyMine data for FBgn0013812.
Homophila reports that CG3723 is a close match (0) to human gene CILD7;DNAH11;DNAHBL;DNAHC11;KTGS3 (NP_003768), a gene associated with Ciliary dyskinesia, primary 7, 611884 (3);Kartagener syndrome, 612273 (3).
VDRC has 2 RNAi stocks for FBgn0013812 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain8 ± 00 of 4 0.80None
Head33 ± 14 of 4 3.10Up
Eye13 ± 10 of 4 1.27None
Thoracicoabdominal ganglion19 ± 30 of 4 1.80None
Salivary gland35 ± 40 of 4 3.31Up
Crop18 ± 11 of 4 1.70None
Midgut13 ± 10 of 4 1.30None
Tubule13 ± 10 of 4 1.20Up
Hindgut15 ± 10 of 4 1.40None
Heart8 ± 20 of 4 0.82None
Fat body17 ± 40 of 4 1.59None
Ovary3 ± 10 of 4 0.30None
Testis1 ± 00 of 4 0.20Down
Male accessory glands10 ± 10 of 4 1.00None
Virgin spermatheca14 ± 10 of 4 1.39None
Mated spermatheca17 ± 11 of 4 1.63None
Adult carcass32 ± 21 of 4 3.00Up
Larval CNS7 ± 30 of 4 0.66None
Larval Salivary gland15 ± 10 of 4 1.41None
Larval midgut16 ± 20 of 4 1.49None
Larval tubule16 ± 40 of 4 1.50None
Larval hindgut7 ± 00 of 4 0.66None
Larval fat body15 ± 50 of 4 1.50None
Larval trachea7 ± 40 of 4 0.69None
Larval carcass14 ± 21 of 4 1.37None
S2 cells (growing)14 ± 00 of 4 1.32None
Whole fly10 ± 20 of 4

Looking for FBgn0013812. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime