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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0014006 through 18771 annotations produced 1 hits



Apoptotic signal-regulating kinase 1 (Pk92B):

Annotation Number : CG4720
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014006
Gbrowse : chr3R:15705440-15711752 (+) // 99.87 //
Probeset : 1635903_at
Accessions : protein= NP_477089; /// NP_996240;, nucleotide= NM_057741; /// NM_206518;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0014006.
Homophila reports that CG4720 is a close match (8e-11) to human gene LKB1;PJS;STK11 (NP_000446), a gene associated with Melanoma, malignant sporadic (3);Pancreatic cancer, sporadic (3);Peutz-Jeghers syndrome, 175200 (3);Testicular tumor, sporadic, 273300 (3).
TRiP has 2 RNAi stocks for FBgn0014006 available for purchase.
VDRC has 3 RNAi stocks for FBgn0014006 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain153 ± 54 of 4 1.20Up
Head124 ± 64 of 4 1.00None
Eye176 ± 44 of 4 1.37Up
Thoracicoabdominal ganglion165 ± 74 of 4 1.30Up
Salivary gland199 ± 94 of 4 1.54Up
Crop394 ± 74 of 4 3.00Up
Midgut127 ± 104 of 4 1.00None
Tubule144 ± 24 of 4 1.10Up
Hindgut259 ± 124 of 4 2.00Up
Heart234 ± 114 of 4 1.82Up
Fat body144 ± 174 of 4 1.12None
Ovary211 ± 34 of 4 1.60Up
Testis55 ± 64 of 4 0.40Down
Male accessory glands186 ± 94 of 4 1.40Up
Virgin spermatheca200 ± 54 of 4 1.55Up
Mated spermatheca230 ± 164 of 4 1.79Up
Adult carcass177 ± 114 of 4 1.40Up
Larval CNS136 ± 64 of 4 1.06None
Larval Salivary gland176 ± 104 of 4 1.36Up
Larval midgut145 ± 74 of 4 1.12None
Larval tubule117 ± 134 of 4 0.90None
Larval hindgut178 ± 134 of 4 1.38Up
Larval fat body74 ± 44 of 4 0.60Down
Larval trachea217 ± 264 of 4 1.68Up
Larval carcass289 ± 104 of 4 2.24Up
S2 cells (growing)118 ± 64 of 4 0.92None
Whole fly129 ± 44 of 4

Looking for FBgn0014006. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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