Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0014018 through 18771 annotations produced 1 hits



relish (Rel):

Annotation Number : CG11992
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014018
Gbrowse : chr3R:4869899-4873699 (-) // 100.0 //
Probeset : 1627376_at
Accessions : protein= NP_477094; /// NP_996187; /// NP_996188; /// NP_996189;, nucleotide= NM_057746; /// NM_206465; /// NM_206466; /// NM_206467;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from expression pattern
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 00057
FlyMine data for FBgn0014018.
BDGP gene expression has embryonic in situ data for Rel: 77 pix of staining in 24 body parts.
Homophila reports that CG11992 is a close match (6e-12) to human gene IKBA;NFKBIA (NP_065390), a gene associated with Ectodermal dysplasia, anhidrotic, with T-cell immunodeficiency, 612132 (3).
BioGrid reports that CG11992 interacts with CG6134 CG5490 .
TRiP has 2 RNAi stocks for FBgn0014018 available for purchase.
VDRC has 3 RNAi stocks for FBgn0014018 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain114 64 of 4 0.50Down
Head445 354 of 4 1.80Up
Eye309 384 of 4 1.24None
Thoracicoabdominal ganglion147 54 of 4 0.60Down
Salivary gland338 204 of 4 1.35Up
Crop724 104 of 4 2.90Up
Midgut517 154 of 4 2.10Up
Tubule783 914 of 4 3.10Up
Hindgut735 334 of 4 2.90Up
Heart629 1694 of 4 2.52None
Fat body560 1514 of 4 2.24Up
Ovary211 64 of 4 0.80None
Testis40 34 of 4 0.20Down
Male accessory glands380 224 of 4 1.50Up
Virgin spermatheca996 514 of 4 3.98Up
Mated spermatheca824 314 of 4 3.29Up
Adult carcass426 344 of 4 1.70Up
Larval CNS120 94 of 4 0.48Down
Larval Salivary gland250 104 of 4 1.00None
Larval midgut443 324 of 4 1.77Up
Larval tubule398 124 of 4 1.60Up
Larval hindgut643 44 of 4 2.57Up
Larval fat body685 554 of 4 2.70Up
Larval trachea555 1924 of 4 2.22Up
Larval carcass558 664 of 4 2.23Up
S2 cells (growing)762 244 of 4 3.05Up
Whole fly250 144 of 4

Looking for FBgn0014018. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime