FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0014024 through 18771 annotations produced 1 hits

RNA-binding protein 4F (Rnp4F):

Annotation Number : CG3312
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014024
Gbrowse : chrX:5212954-5216743 (-) // 100.0 //
Probeset : 1638803_at
Accessions : protein= NP_001096883; /// NP_001096884; /// NP_511047; /// NP_996353;, nucleotide= NM_001103413; /// NM_001103414; /// NM_078492; /// NM_206630;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0014024.
BDGP gene expression has embryonic in situ data for Rnp4F: 23 pix of staining in 16 body parts.
Homophila reports that CG3312 is a close match (1e-14) to human gene DSAP1;KIAA0156;P100;SART3;TIP110 (NP_055521), a gene associated with Porokeratosis, disseminated superficial actinic, 1, 175900 (3).
TRiP has 1 RNAi stocks for FBgn0014024 available for purchase.
VDRC has 3 RNAi stocks for FBgn0014024 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	177 ± 5	4 of 4	1.30	Up
Head	103 ± 13	4 of 4	0.70	None
Eye	93 ± 6	4 of 4	0.66	Down
Thoracicoabdominal ganglion	154 ± 11	4 of 4	1.10	None
Salivary gland	111 ± 10	4 of 4	0.79	None
Crop	144 ± 7	4 of 4	1.00	None
Midgut	121 ± 8	4 of 4	0.90	None
Tubule	123 ± 5	4 of 4	0.90	Down
Hindgut	114 ± 1	4 of 4	0.80	Down
Heart	68 ± 1	4 of 4	0.48	Down
Fat body	118 ± 7	4 of 4	0.84	Down
Ovary	324 ± 3	4 of 4	2.30	Up
Testis	55 ± 2	4 of 4	0.40	Down
Male accessory glands	108 ± 8	4 of 4	0.80	Down
Virgin spermatheca	185 ± 7	4 of 4	1.31	Up
Mated spermatheca	204 ± 7	4 of 4	1.45	Up
Adult carcass	102 ± 1	4 of 4	0.70	Down
Larval CNS	305 ± 45	4 of 4	2.17	Up
Larval Salivary gland	134 ± 8	4 of 4	0.96	None
Larval midgut	126 ± 2	4 of 4	0.89	Down
Larval tubule	98 ± 4	4 of 4	0.70	Down
Larval hindgut	125 ± 2	4 of 4	0.89	Down
Larval fat body	80 ± 5	4 of 4	0.60	Down
Larval trachea	104 ± 12	4 of 4	0.74	Down
Larval carcass	110 ± 4	4 of 4	0.79	Down
S2 cells (growing)	198 ± 4	4 of 4	1.41	Up
Whole fly	141 ± 4	4 of 4

Looking for FBgn0014024. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720