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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0014037 through 18771 annotations produced 1 hits



Suppressor of GMR-sina 3-4 (Su(Tpl)):

Annotation Number : CG32217
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014037
Gbrowse : chr3L:19884485-19886504 (-) // 100.0 //
Probeset : 1639318_at
Accessions : protein= NP_001163477; /// NP_649155;, nucleotide= NM_001170006; /// NM_140898;
Pathway : 0005700 // polytene chromosome // inferred from direct assay /// 0008023 // transcription elongation factor complex // i
Interpro : 0003711 // transcription elongation regulator activity // inferred from sequence or structural similarity /// 0005515 //
FlyMine data for FBgn0014037.
Homophila reports that CG32217 is a close match (5e-12) to human gene DFNB49;MARVD2;MARVELD2;TRIC (NP_001033692), a gene associated with Deafness, autosomal recessive 49, 610153 (3).
BioGrid reports that CG32217 interacts with CG3166 CG9375 CG9375 CG9375 CG18085 CG9949 CG11387 CG3936 CG9375 CG9375 CG9375 CG3166 CG3166 CG3166 .
TRiP has 2 RNAi stocks for FBgn0014037 available for purchase.
VDRC has 2 RNAi stocks for FBgn0014037 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain566 444 of 4 1.40Up
Head388 194 of 4 1.00None
Eye388 124 of 4 0.97None
Thoracicoabdominal ganglion581 224 of 4 1.50Up
Salivary gland884 324 of 4 2.22Up
Crop497 34 of 4 1.20Up
Midgut528 74 of 4 1.30Up
Tubule587 284 of 4 1.50Up
Hindgut498 84 of 4 1.20Up
Heart409 194 of 4 1.03None
Fat body488 544 of 4 1.22Up
Ovary542 84 of 4 1.40Up
Testis709 424 of 4 1.80Up
Male accessory glands376 114 of 4 0.90None
Virgin spermatheca490 184 of 4 1.23Up
Mated spermatheca505 164 of 4 1.27Up
Adult carcass550 234 of 4 1.40Up
Larval CNS422 74 of 4 1.06None
Larval Salivary gland839 84 of 4 2.11Up
Larval midgut404 124 of 4 1.01None
Larval tubule485 104 of 4 1.20Up
Larval hindgut413 124 of 4 1.04None
Larval fat body549 294 of 4 1.40Up
Larval trachea595 244 of 4 1.49Up
Larval carcass591 214 of 4 1.48Up
S2 cells (growing)629 144 of 4 1.58Up
Whole fly398 194 of 4

Looking for FBgn0014037. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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