FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0014135 through 18771 annotations produced 3 hits

fibroblast growth factor (bnl):

Annotation Number : CG4608
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014135
Gbrowse : chr3R:15620310-15662539 (-) // 100.0 //
Probeset : 1627135_at
Accessions : protein= NP_001138083; /// NP_732452;, nucleotide= NM_001144611; /// NM_169874;
Pathway : open tracheal system // traceable author statement /// 0007427 // epithelial cell migration
Interpro : open tracheal system // traceable author statement /// 0007428 // primary branching
FlyMine data for FBgn0014135.
BDGP gene expression has embryonic in situ data for bnl: 38 pix of staining in 6 body parts.
Homophila reports that CG4608 is a close match (1e-16) to human gene FGF10 (NP_004456), a gene associated with Aplasia of lacrimal and salivary glands, 180920 (3);LADD syndrome, 149730 (3).
BioGrid reports that CG4608 interacts with CG4853 CG9786 CG7847 CG5058 CG10072 CG31317 CG31317 CG31317 CG31317 CG8339 .
TRiP has 1 RNAi stocks for FBgn0014135 available for purchase.
VDRC has 2 RNAi stocks for FBgn0014135 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 0	4 of 4	0.60	Down
Head	23 ± 1	4 of 4	1.10	None
Eye	6 ± 0	3 of 4	0.32	Down
Thoracicoabdominal ganglion	25 ± 1	4 of 4	1.20	None
Salivary gland	105 ± 14	4 of 4	4.98	Up
Crop	23 ± 2	4 of 4	1.10	None
Midgut	80 ± 4	4 of 4	3.80	Up
Tubule	136 ± 13	4 of 4	6.50	Up
Hindgut	142 ± 7	4 of 4	6.70	Up
Heart	94 ± 9	4 of 4	4.49	Up
Fat body	56 ± 5	4 of 4	2.69	Up
Ovary	2 ± 1	0 of 4	0.10	Down
Testis	31 ± 1	4 of 4	1.50	Up
Male accessory glands	26 ± 1	4 of 4	1.30	None
Virgin spermatheca	68 ± 5	4 of 4	3.27	Up
Mated spermatheca	59 ± 3	4 of 4	2.80	Up
Adult carcass	36 ± 2	4 of 4	1.70	Up
Larval CNS	18 ± 0	4 of 4	0.85	None
Larval Salivary gland	4 ± 1	0 of 4	0.23	Down
Larval midgut	63 ± 11	4 of 4	3.02	Up
Larval tubule	57 ± 8	4 of 4	2.70	Up
Larval hindgut	105 ± 15	4 of 4	5.01	Up
Larval fat body	6 ± 2	2 of 4	0.30	Down
Larval trachea	168 ± 29	4 of 4	8.00	Up
Larval carcass	40 ± 3	4 of 4	1.93	Up
S2 cells (growing)	81 ± 1	4 of 4	3.86	Up
Whole fly	21 ± 2	4 of 4

fibroblast growth factor (bnl):

Annotation Number : CG4608
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014135
Gbrowse : chr3R:15619798-15662539 (-) // 99.89 //
Probeset : 1634109_a_at
Accessions : protein= NP_001138083; /// NP_732452;, nucleotide= NM_001144611; /// NM_169874;
Pathway : open tracheal system // traceable author statement /// 0007427 // epithelial cell migration
Interpro : open tracheal system // traceable author statement /// 0007428 // primary branching
FlyMine data for FBgn0014135.
BDGP gene expression has embryonic in situ data for bnl: 38 pix of staining in 6 body parts.
Homophila reports that CG4608 is a close match (1e-16) to human gene FGF10 (NP_004456), a gene associated with Aplasia of lacrimal and salivary glands, 180920 (3);LADD syndrome, 149730 (3).
BioGrid reports that CG4608 interacts with CG4853 CG9786 CG7847 CG5058 CG10072 CG31317 CG31317 CG31317 CG31317 CG8339 .
TRiP has 1 RNAi stocks for FBgn0014135 available for purchase.
VDRC has 2 RNAi stocks for FBgn0014135 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.60	None
Head	6 ± 0	0 of 4	1.10	None
Eye	3 ± 0	0 of 4	0.55	None
Thoracicoabdominal ganglion	5 ± 1	1 of 4	0.90	None
Salivary gland	24 ± 1	0 of 4	3.84	Up
Crop	5 ± 0	0 of 4	0.90	None
Midgut	7 ± 1	0 of 4	1.20	None
Tubule	15 ± 1	3 of 4	2.40	Up
Hindgut	15 ± 2	2 of 4	2.40	Up
Heart	11 ± 1	2 of 4	1.89	Up
Fat body	2 ± 1	0 of 4	0.41	None
Ovary	1 ± 1	0 of 4	0.30	None
Testis	12 ± 1	3 of 4	2.00	Up
Male accessory glands	1 ± 0	0 of 4	0.20	Down
Virgin spermatheca	3 ± 1	0 of 4	0.61	None
Mated spermatheca	3 ± 1	0 of 4	0.53	None
Adult carcass	8 ± 2	0 of 4	1.40	None
Larval CNS	6 ± 2	1 of 4	1.03	None
Larval Salivary gland	2 ± 0	0 of 4	0.33	None
Larval midgut	6 ± 1	0 of 4	1.04	None
Larval tubule	6 ± 2	1 of 4	1.10	None
Larval hindgut	12 ± 2	2 of 4	2.04	None
Larval fat body	1 ± 0	0 of 4	0.20	Down
Larval trachea	10 ± 2	1 of 4	1.74	None
Larval carcass	6 ± 2	0 of 4	1.08	None
S2 cells (growing)	11 ± 1	3 of 4	1.85	None
Whole fly	6 ± 1	0 of 4

fibroblast growth factor (bnl):

Annotation Number : CG4608
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014135
Gbrowse : chr3R:15619798-15662539 (-) // 99.89 //
Probeset : 1637225_at
Accessions : protein= NP_001138083; /// NP_732452;, nucleotide= NM_001144611; /// NM_169874;
Pathway : open tracheal system // traceable author statement /// 0007427 // epithelial cell migration
Interpro : open tracheal system // traceable author statement /// 0007428 // primary branching
FlyMine data for FBgn0014135.
BDGP gene expression has embryonic in situ data for bnl: 38 pix of staining in 6 body parts.
Homophila reports that CG4608 is a close match (1e-16) to human gene FGF10 (NP_004456), a gene associated with Aplasia of lacrimal and salivary glands, 180920 (3);LADD syndrome, 149730 (3).
BioGrid reports that CG4608 interacts with CG4853 CG9786 CG7847 CG5058 CG10072 CG31317 CG31317 CG31317 CG31317 CG8339 .
TRiP has 1 RNAi stocks for FBgn0014135 available for purchase.
VDRC has 2 RNAi stocks for FBgn0014135 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	1 of 4	1.00	None
Head	7 ± 0	3 of 4	1.60	None
Eye	5 ± 0	2 of 4	1.21	None
Thoracicoabdominal ganglion	6 ± 1	1 of 4	1.50	None
Salivary gland	11 ± 3	1 of 4	2.76	None
Crop	5 ± 1	0 of 4	1.40	None
Midgut	11 ± 2	4 of 4	2.80	Up
Tubule	25 ± 2	3 of 4	5.90	Up
Hindgut	13 ± 1	4 of 4	3.20	Up
Heart	9 ± 1	4 of 4	2.32	Up
Fat body	9 ± 3	2 of 4	2.12	None
Ovary	2 ± 0	0 of 4	0.50	None
Testis	4 ± 1	1 of 4	1.00	None
Male accessory glands	4 ± 2	0 of 4	1.10	None
Virgin spermatheca	8 ± 1	3 of 4	2.07	None
Mated spermatheca	7 ± 0	2 of 4	1.69	None
Adult carcass	6 ± 3	1 of 4	1.40	None
Larval CNS	20 ± 2	4 of 4	4.94	Up
Larval Salivary gland	3 ± 1	0 of 4	0.81	None
Larval midgut	12 ± 3	3 of 4	2.96	None
Larval tubule	9 ± 1	3 of 4	2.30	Up
Larval hindgut	10 ± 1	4 of 4	2.54	Up
Larval fat body	2 ± 1	0 of 4	0.60	None
Larval trachea	20 ± 2	4 of 4	4.74	Up
Larval carcass	7 ± 1	2 of 4	1.84	None
S2 cells (growing)	3 ± 0	3 of 4	0.91	None
Whole fly	4 ± 1	1 of 4

Looking for FBgn0014135. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720