Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0014189 through 18771 annotations produced 1 hits



RNA helicase (Hel25E):

Annotation Number : CG7269
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014189
Gbrowse : chr2L:5539325-5542310 (-) // 100.0 //
Probeset : 1629620_s_at
Accessions : protein= NP_723089; /// NP_723090; /// NP_723091;, nucleotide= NM_164646; /// NM_164647; /// NM_164648;
Pathway : via spliceosome // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from elec
FlyMine data for FBgn0014189.
BDGP gene expression has embryonic in situ data for Hel25E: 10 pix of staining in 8 body parts.
BioGrid reports that CG7269 interacts with CG8155 .
TRiP has 1 RNAi stocks for FBgn0014189 available for purchase.
VDRC has 3 RNAi stocks for FBgn0014189 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain328 ± 104 of 4 0.40Down
Head305 ± 154 of 4 0.30Down
Eye269 ± 94 of 4 0.30Down
Thoracicoabdominal ganglion327 ± 184 of 4 0.40Down
Salivary gland195 ± 94 of 4 0.22Down
Crop377 ± 294 of 4 0.40Down
Midgut266 ± 64 of 4 0.30Down
Tubule358 ± 164 of 4 0.40Down
Hindgut310 ± 74 of 4 0.30Down
Heart266 ± 94 of 4 0.30Down
Fat body309 ± 224 of 4 0.35Down
Ovary1592 ± 254 of 4 1.80Up
Testis177 ± 34 of 4 0.20Down
Male accessory glands658 ± 394 of 4 0.70None
Virgin spermatheca625 ± 174 of 4 0.70Down
Mated spermatheca561 ± 194 of 4 0.63Down
Adult carcass242 ± 244 of 4 0.30Down
Larval CNS1354 ± 564 of 4 1.53Up
Larval Salivary gland1112 ± 394 of 4 1.25None
Larval midgut244 ± 84 of 4 0.28Down
Larval tubule391 ± 44 of 4 0.40Down
Larval hindgut514 ± 154 of 4 0.58Down
Larval fat body324 ± 284 of 4 0.40Down
Larval trachea584 ± 714 of 4 0.66Down
Larval carcass560 ± 454 of 4 0.63Down
S2 cells (growing)1047 ± 264 of 4 1.18None
Whole fly887 ± 824 of 4

Looking for FBgn0014189. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime