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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0014269 through 18771 annotations produced 1 hits



proliferation disrupter (prod):

Annotation Number : CG18608
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014269
Gbrowse : chr2R:14856909-14858656 (-) // 100.0 //
Probeset : 1623239_at
Accessions : protein= NP_725841;, nucleotide= NM_166317;
Pathway : "0000775 // chromosome
Interpro : centromeric region // inferred from direct assay /// 0000792 // heterochromatin // inferred from direct assay /// 00056
FlyMine data for FBgn0014269.
BDGP gene expression has embryonic in situ data for prod: 11 pix of staining in 9 body parts.
BioGrid reports that CG18608 interacts with CG2652 CG32171 CG4799 CG7967 CG9576 .
VDRC has 1 RNAi stocks for FBgn0014269 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain125 34 of 4 1.00None
Head87 54 of 4 0.70Down
Eye85 14 of 4 0.65Down
Thoracicoabdominal ganglion92 34 of 4 0.70Down
Salivary gland134 74 of 4 1.02None
Crop99 14 of 4 0.80Down
Midgut76 44 of 4 0.60Down
Tubule54 24 of 4 0.40Down
Hindgut84 34 of 4 0.60Down
Heart60 54 of 4 0.46Down
Fat body62 134 of 4 0.48Down
Ovary219 54 of 4 1.70Up
Testis66 64 of 4 0.50Down
Male accessory glands108 20 of 4 0.80Down
Virgin spermatheca38 14 of 4 0.29Down
Mated spermatheca46 24 of 4 0.35Down
Adult carcass53 13 of 4 0.40Down
Larval CNS211 114 of 4 1.60Up
Larval Salivary gland136 34 of 4 1.04None
Larval midgut63 14 of 4 0.48Down
Larval tubule62 24 of 4 0.50Down
Larval hindgut88 54 of 4 0.67Down
Larval fat body56 34 of 4 0.40Down
Larval trachea107 74 of 4 0.82Down
Larval carcass86 44 of 4 0.66Down
S2 cells (growing)181 44 of 4 1.38Up
Whole fly131 74 of 4

Looking for FBgn0014269. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime