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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0014455 through 18771 annotations produced 1 hits



AdoHcyase (Ahcy13):

Annotation Number : CG11654
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014455
Gbrowse : chrUextra:1682137-1682855 (+) // 44.85 // /// chrX:15344294-15346683 (+) // 100.0 // /// chrUextra:17524322-17524917 (-) // 37.16 //
Probeset : 1629222_at
Accessions : protein= NP_511164;, nucleotide= NM_078609;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004013 // adenosylhomocysteinase activity // i
FlyMine data for FBgn0014455.
BDGP gene expression has embryonic in situ data for Ahcy13: 13 pix of staining in 20 body parts.
Homophila reports that CG11654 is a close match (0) to human gene AHCY;SAHH (NP_000678), a gene associated with Hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolase (3).
BioGrid reports that CG11654 interacts with CG14231 CG5123 CG15479 CG5009 .
VDRC has 2 RNAi stocks for FBgn0014455 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain180 74 of 4 0.20Down
Head562 724 of 4 0.50Down
Eye458 684 of 4 0.43Down
Thoracicoabdominal ganglion163 64 of 4 0.20Down
Salivary gland266 54 of 4 0.25Down
Crop413 84 of 4 0.40Down
Midgut369 154 of 4 0.30Down
Tubule1105 514 of 4 1.00None
Hindgut363 114 of 4 0.30Down
Heart821 334 of 4 0.78Down
Fat body1343 1314 of 4 1.27Up
Ovary1365 214 of 4 1.30Up
Testis144 34 of 4 0.10Down
Male accessory glands1125 1284 of 4 1.10None
Virgin spermatheca1513 1104 of 4 1.43Up
Mated spermatheca1187 384 of 4 1.12None
Adult carcass847 564 of 4 0.80Down
Larval CNS679 384 of 4 0.64Down
Larval Salivary gland1070 254 of 4 1.01None
Larval midgut409 364 of 4 0.39Down
Larval tubule372 174 of 4 0.40Down
Larval hindgut556 184 of 4 0.53Down
Larval fat body974 574 of 4 0.90None
Larval trachea1425 1144 of 4 1.35Up
Larval carcass844 1124 of 4 0.80None
S2 cells (growing)1096 304 of 4 1.03None
Whole fly1059 634 of 4

Looking for FBgn0014455. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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