FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0014455 through 18771 annotations produced 1 hits

AdoHcyase (Ahcy13):

Annotation Number : CG11654
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014455
Gbrowse : chrUextra:1682137-1682855 (+) // 44.85 // /// chrX:15344294-15346683 (+) // 100.0 // /// chrUextra:17524322-17524917 (-) // 37.16 //
Probeset : 1629222_at
Accessions : protein= NP_511164;, nucleotide= NM_078609;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004013 // adenosylhomocysteinase activity // i
FlyMine data for FBgn0014455.
BDGP gene expression has embryonic in situ data for Ahcy13: 13 pix of staining in 20 body parts.
Homophila reports that CG11654 is a close match (0) to human gene AHCY;SAHH (NP_000678), a gene associated with Hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolase (3).
BioGrid reports that CG11654 interacts with CG14231 CG5123 CG15479 CG5009 .
VDRC has 2 RNAi stocks for FBgn0014455 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	180 ± 7	4 of 4	0.20	Down
Head	562 ± 72	4 of 4	0.50	Down
Eye	458 ± 68	4 of 4	0.43	Down
Thoracicoabdominal ganglion	163 ± 6	4 of 4	0.20	Down
Salivary gland	266 ± 5	4 of 4	0.25	Down
Crop	413 ± 8	4 of 4	0.40	Down
Midgut	369 ± 15	4 of 4	0.30	Down
Tubule	1105 ± 51	4 of 4	1.00	None
Hindgut	363 ± 11	4 of 4	0.30	Down
Heart	821 ± 33	4 of 4	0.78	Down
Fat body	1343 ± 131	4 of 4	1.27	Up
Ovary	1365 ± 21	4 of 4	1.30	Up
Testis	144 ± 3	4 of 4	0.10	Down
Male accessory glands	1125 ± 128	4 of 4	1.10	None
Virgin spermatheca	1513 ± 110	4 of 4	1.43	Up
Mated spermatheca	1187 ± 38	4 of 4	1.12	None
Adult carcass	847 ± 56	4 of 4	0.80	Down
Larval CNS	679 ± 38	4 of 4	0.64	Down
Larval Salivary gland	1070 ± 25	4 of 4	1.01	None
Larval midgut	409 ± 36	4 of 4	0.39	Down
Larval tubule	372 ± 17	4 of 4	0.40	Down
Larval hindgut	556 ± 18	4 of 4	0.53	Down
Larval fat body	974 ± 57	4 of 4	0.90	None
Larval trachea	1425 ± 114	4 of 4	1.35	Up
Larval carcass	844 ± 112	4 of 4	0.80	None
S2 cells (growing)	1096 ± 30	4 of 4	1.03	None
Whole fly	1059 ± 63	4 of 4

Looking for FBgn0014455. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720