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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0014851 through 18771 annotations produced 1 hits



Eig71Ek (Eig71Ek):

Annotation Number : CG7325
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014851
Gbrowse : chr3L:15654347-15654903 (+) // 100.0 //
Probeset : 1632749_at
Accessions : protein= NP_648797;, nucleotide= NM_140540;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0014851.
VDRC has 1 RNAi stocks for FBgn0014851 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.70None
Head2 ± 00 of 4 0.80None
Eye2 ± 00 of 4 1.09None
Thoracicoabdominal ganglion2 ± 11 of 4 0.90None
Salivary gland10 ± 20 of 4 3.78Up
Crop5 ± 01 of 4 1.80None
Midgut2 ± 10 of 4 0.90None
Tubule3 ± 00 of 4 1.20None
Hindgut3 ± 00 of 4 1.10None
Heart2 ± 11 of 4 0.85None
Fat body6 ± 23 of 4 2.53Up
Ovary1 ± 00 of 4 0.50None
Testis3 ± 00 of 4 1.20None
Male accessory glands5 ± 00 of 4 1.80None
Virgin spermatheca4 ± 01 of 4 1.74None
Mated spermatheca4 ± 11 of 4 1.81None
Adult carcass2 ± 10 of 4 0.80None
Larval CNS3 ± 11 of 4 1.35None
Larval Salivary gland4 ± 11 of 4 1.52None
Larval midgut4 ± 10 of 4 1.52None
Larval tubule2 ± 00 of 4 1.00None
Larval hindgut2 ± 00 of 4 1.07None
Larval fat body1 ± 00 of 4 0.50None
Larval trachea2 ± 10 of 4 1.09None
Larval carcass2 ± 10 of 4 1.03None
S2 cells (growing)3 ± 00 of 4 1.12None
Whole fly2 ± 00 of 4

Looking for FBgn0014851. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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