FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0014857 through 18771 annotations produced 1 hits

histone H3.3 variant (His3.3A):

Annotation Number : CG5825
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014857
Gbrowse : chr2L:5055057-5056000 (+) // 100.0 //
Probeset : 1627685_a_at
Accessions : protein= NP_511095; /// NP_523479; /// NP_723056; /// NP_727314; /// NP_788892;, nucleotide= NM_078540; /// NM_078755; /// NM_164624; /// NM_167180; /// NM_176719;
Pathway : 0000786 // nucleosome // inferred from sequence or structural similarity /// 0000786 // nucleosome // inferred from elec
Interpro : 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from el
FlyMine data for FBgn0014857.
BioGrid reports that CG5825 interacts with CG7755 .
VDRC has 2 RNAi stocks for FBgn0014857 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	636 ± 8	4 of 4	1.10	None
Head	767 ± 10	4 of 4	1.30	Up
Eye	1533 ± 65	4 of 4	2.65	Up
Thoracicoabdominal ganglion	578 ± 14	4 of 4	1.00	None
Salivary gland	1907 ± 62	4 of 4	3.30	Up
Crop	504 ± 16	4 of 4	0.90	None
Midgut	1499 ± 29	4 of 4	2.60	Up
Tubule	135 ± 3	4 of 4	0.20	Down
Hindgut	786 ± 40	4 of 4	1.40	Up
Heart	711 ± 41	4 of 4	1.23	None
Fat body	607 ± 70	4 of 4	1.05	None
Ovary	579 ± 9	4 of 4	1.00	None
Testis	460 ± 14	4 of 4	0.80	None
Male accessory glands	503 ± 13	4 of 4	0.90	None
Virgin spermatheca	246 ± 19	4 of 4	0.43	Down
Mated spermatheca	212 ± 14	4 of 4	0.37	Down
Adult carcass	643 ± 47	4 of 4	1.10	None
Larval CNS	1625 ± 153	4 of 4	2.81	Up
Larval Salivary gland	1122 ± 99	4 of 4	1.94	Up
Larval midgut	636 ± 15	4 of 4	1.10	None
Larval tubule	397 ± 6	4 of 4	0.70	Down
Larval hindgut	470 ± 12	4 of 4	0.81	None
Larval fat body	477 ± 13	4 of 4	0.80	None
Larval trachea	767 ± 31	4 of 4	1.33	Up
Larval carcass	445 ± 22	4 of 4	0.77	None
S2 cells (growing)	1648 ± 25	4 of 4	2.85	Up
Whole fly	577 ± 50	4 of 4

Looking for FBgn0014857. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720