Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0014861 through 18771 annotations produced 1 hits



Minichromosome maintenance 2 (Mcm2):

Annotation Number : CG7538
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014861
Gbrowse : chr3R:4090564-4093653 (+) // 100.0 //
Probeset : 1632669_at
Accessions : protein= NP_477121;, nucleotide= NM_057773;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electro
FlyMine data for FBgn0014861.
BDGP gene expression has embryonic in situ data for Mcm2: 18 pix of staining in 24 body parts.
Homophila reports that CG7538 is a close match (5e-90) to human gene MCM6 (NP_005906), a gene associated with Lactase persistance/nonpersistance, 223100 (3);[Tall stature, susceptibility to], 606255 (3).
TRiP has 1 RNAi stocks for FBgn0014861 available for purchase.
VDRC has 2 RNAi stocks for FBgn0014861 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 11 of 4 0.00Down
Head29 ± 34 of 4 0.10Down
Eye13 ± 14 of 4 0.03Down
Thoracicoabdominal ganglion8 ± 21 of 4 0.00Down
Salivary gland13 ± 41 of 4 0.03Down
Crop27 ± 34 of 4 0.10Down
Midgut25 ± 14 of 4 0.10Down
Tubule21 ± 64 of 4 0.10Down
Hindgut16 ± 34 of 4 0.00Down
Heart16 ± 24 of 4 0.04Down
Fat body23 ± 104 of 4 0.05Down
Ovary894 ± 164 of 4 2.10Up
Testis27 ± 14 of 4 0.10Down
Male accessory glands16 ± 24 of 4 0.00Down
Virgin spermatheca17 ± 14 of 4 0.04Down
Mated spermatheca22 ± 24 of 4 0.05Down
Adult carcass35 ± 74 of 4 0.10Down
Larval CNS594 ± 264 of 4 1.39Up
Larval Salivary gland195 ± 104 of 4 0.46Down
Larval midgut29 ± 34 of 4 0.07Down
Larval tubule20 ± 04 of 4 0.00Down
Larval hindgut80 ± 44 of 4 0.19Down
Larval fat body33 ± 24 of 4 0.10Down
Larval trachea201 ± 254 of 4 0.47Down
Larval carcass142 ± 104 of 4 0.33Down
S2 cells (growing)332 ± 134 of 4 0.78Down
Whole fly426 ± 244 of 4

Looking for FBgn0014861. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime