FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0014879 through 18771 annotations produced 1 hits

Set (Set):

Annotation Number : CG4299
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014879
Gbrowse : chr3R:11089256-11090975 (+) // 100.0 //
Probeset : 1637578_at
Accessions : protein= NP_650438;, nucleotide= NM_142181;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0030332 // cyclin binding // non-traceable author s
FlyMine data for FBgn0014879.
BDGP gene expression has embryonic in situ data for Set: 21 pix of staining in 17 body parts.
Homophila reports that CG4299 is a close match (4e-37) to human gene SIDDT;TSPYL;TSPYL1 (NP_003300), a gene associated with Sudden infant death with dysgenesis of the testes syndrome, 608800 (3).
BioGrid reports that CG4299 interacts with CG4877 CG5798 .
VDRC has 2 RNAi stocks for FBgn0014879 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	255 ± 6	4 of 4	0.50	Down
Head	172 ± 9	4 of 4	0.30	Down
Eye	265 ± 7	4 of 4	0.50	Down
Thoracicoabdominal ganglion	252 ± 5	4 of 4	0.50	Down
Salivary gland	169 ± 2	4 of 4	0.32	Down
Crop	253 ± 10	4 of 4	0.50	Down
Midgut	230 ± 11	4 of 4	0.40	Down
Tubule	210 ± 5	4 of 4	0.40	Down
Hindgut	223 ± 3	4 of 4	0.40	Down
Heart	196 ± 4	4 of 4	0.37	Down
Fat body	192 ± 14	4 of 4	0.36	Down
Ovary	1084 ± 10	4 of 4	2.00	Up
Testis	201 ± 10	4 of 4	0.40	Down
Male accessory glands	392 ± 11	4 of 4	0.70	Down
Virgin spermatheca	120 ± 4	4 of 4	0.22	Down
Mated spermatheca	149 ± 9	4 of 4	0.28	Down
Adult carcass	135 ± 6	4 of 4	0.30	Down
Larval CNS	1579 ± 62	4 of 4	2.96	Up
Larval Salivary gland	859 ± 16	4 of 4	1.61	Up
Larval midgut	219 ± 4	4 of 4	0.41	Down
Larval tubule	265 ± 8	4 of 4	0.50	Down
Larval hindgut	311 ± 6	4 of 4	0.58	Down
Larval fat body	235 ± 10	4 of 4	0.40	Down
Larval trachea	662 ± 99	4 of 4	1.24	None
Larval carcass	422 ± 15	4 of 4	0.79	Down
S2 cells (growing)	678 ± 11	4 of 4	1.27	Up
Whole fly	534 ± 21	4 of 4

Looking for FBgn0014879. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720