FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0014949 through 18771 annotations produced 1 hits

buttonless (btn):

Annotation Number : CG5264
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014949
Gbrowse : chr3R:18411786-18414118 (-) // 100.0 //
Probeset : 1635930_at
Accessions : protein= NP_732768;, nucleotide= NM_170026;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from electronic annotation /// 0045449 // regulation of transcription // inferred from electr
FlyMine data for FBgn0014949.
Homophila reports that CG5264 is a close match (3e-11) to human gene HOXA11;HOX1I (NP_005514), a gene associated with Radioulnar synostosis with amegakaryocytic thrombocytopenia, 605432 (3).
TRiP has 1 RNAi stocks for FBgn0014949 available for purchase.
VDRC has 3 RNAi stocks for FBgn0014949 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	1.00	None
Head	0 ± 0	0 of 4	0.80	None
Eye	0 ± 0	0 of 4	1.12	None
Thoracicoabdominal ganglion	11 ± 1	1 of 4	17.80	Up
Salivary gland	3 ± 1	0 of 4	5.62	None
Crop	1 ± 0	0 of 4	2.20	None
Midgut	3 ± 1	0 of 4	5.10	None
Tubule	1 ± 0	0 of 4	2.00	None
Hindgut	0 ± 0	0 of 4	1.20	None
Heart	0 ± 0	0 of 4	1.12	None
Fat body	1 ± 1	0 of 4	1.73	None
Ovary	0 ± 0	0 of 4	1.30	None
Testis	1 ± 0	0 of 4	1.70	None
Male accessory glands	0 ± 0	0 of 4	1.00	None
Virgin spermatheca	1 ± 0	0 of 4	1.92	None
Mated spermatheca	1 ± 1	0 of 4	2.08	None
Adult carcass	4 ± 2	0 of 4	7.10	None
Larval CNS	12 ± 2	2 of 4	19.73	Up
Larval Salivary gland	2 ± 1	0 of 4	3.08	None
Larval midgut	3 ± 1	0 of 4	4.88	None
Larval tubule	1 ± 0	0 of 4	2.50	None
Larval hindgut	2 ± 1	0 of 4	3.35	None
Larval fat body	1 ± 0	0 of 4	1.50	None
Larval trachea	2 ± 1	0 of 4	3.31	None
Larval carcass	1 ± 0	0 of 4	1.77	None
S2 cells (growing)	418 ± 16	4 of 4	643.19	Up
Whole fly	0 ± 0	0 of 4

Looking for FBgn0014949. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720