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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0015010 through 18771 annotations produced 1 hits



antigen 5-related (Ag5r):

Annotation Number : CG9538
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015010
Gbrowse : chrX:14679125-14680266 (-) // 100.0 //
Probeset : 1625266_at
Accessions : protein= NP_524770;, nucleotide= NM_080031;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
FlyMine data for FBgn0015010.
VDRC has 3 RNAi stocks for FBgn0015010 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 ± 11 of 4 0.00Down
Head224 ± 774 of 4 0.10Down
Eye21 ± 191 of 4 0.01Down
Thoracicoabdominal ganglion763 ± 2824 of 4 0.50None
Salivary gland19914 ± 8084 of 413.28Up
Crop4109 ± 3744 of 4 2.70Up
Midgut2208 ± 194 of 4 1.50Up
Tubule2278 ± 9694 of 4 1.50None
Hindgut69 ± 54 of 4 0.00Down
Heart14 ± 33 of 4 0.01Down
Fat body69 ± 803 of 4 0.05Down
Ovary3 ± 10 of 4 0.00Down
Testis8 ± 12 of 4 0.00Down
Male accessory glands10 ± 10 of 4 0.00Down
Virgin spermatheca17 ± 23 of 4 0.01Down
Mated spermatheca10 ± 10 of 4 0.01Down
Adult carcass2591 ± 3054 of 4 1.70Up
Larval CNS5 ± 01 of 4 0.00Down
Larval Salivary gland7717 ± 4634 of 4 5.15Up
Larval midgut4200 ± 3204 of 4 2.80Up
Larval tubule542 ± 694 of 4 0.40Down
Larval hindgut50 ± 124 of 4 0.03Down
Larval fat body42 ± 371 of 4 0.00Down
Larval trachea10 ± 81 of 4 0.01Down
Larval carcass5 ± 10 of 4 0.00Down
S2 cells (growing)6 ± 01 of 4 0.00Down
Whole fly1499 ± 964 of 4

Looking for FBgn0015010. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime