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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0015583 through 18771 annotations produced 1 hits



accessory gland protein (Acp29AB):

Annotation Number : CG17797
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015583
Gbrowse : chr2L:8392474-8393239 (-) // 98.84 //
Probeset : 1624840_at
Accessions : protein= NP_523512;, nucleotide= NM_078788;
Pathway : 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from e
Interpro : 0005179 // hormone activity // non-traceable author statement /// 0005488 // binding // inferred from electronic annotat
FlyMine data for FBgn0015583.
BioGrid reports that CG17797 interacts with CG31999 CG7404 CG8975 .
VDRC has 3 RNAi stocks for FBgn0015583 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 12 of 4 0.00Down
Head2 10 of 4 0.00Down
Eye2 10 of 4 0.01Down
Thoracicoabdominal ganglion3 11 of 4 0.00Down
Salivary gland22 42 of 4 0.13Down
Crop7 11 of 4 0.00Down
Midgut2 10 of 4 0.00Down
Tubule4 00 of 4 0.00Down
Hindgut5 10 of 4 0.00Down
Heart4 00 of 4 0.03Down
Fat body9 33 of 4 0.06Down
Ovary3 11 of 4 0.00Down
Testis16 72 of 4 0.10Down
Male accessory glands7857 1364 of 446.50Up
Virgin spermatheca7 12 of 4 0.04Down
Mated spermatheca10 23 of 4 0.06Down
Adult carcass19 43 of 4 0.10Down
Larval CNS6 33 of 4 0.04Down
Larval Salivary gland3 10 of 4 0.02Down
Larval midgut6 00 of 4 0.04Down
Larval tubule5 11 of 4 0.00Down
Larval hindgut3 01 of 4 0.02Down
Larval fat body2 10 of 4 0.00Down
Larval trachea6 14 of 4 0.04Down
Larval carcass3 01 of 4 0.02Down
S2 cells (growing)3 02 of 4 0.02Down
Whole fly168 244 of 4

Looking for FBgn0015583. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime