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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0015586 through 18771 annotations produced 1 hits



Accessory gland protein 76A (Acp76A):

Annotation Number : CG3801
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015586
Gbrowse : chr3L:19043890-19045126 (-) // 100.0 //
Probeset : 1631665_at
Accessions : protein= NP_524153;, nucleotide= NM_079429;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0004867 // serine-type endopeptidase inhibitor activity // inferred from sequence or structural similarity /// 0004867 /
FlyMine data for FBgn0015586.
VDRC has 3 RNAi stocks for FBgn0015586 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.00None
Head5 ± 10 of 4 0.00None
Eye2 ± 11 of 4 0.00None
Thoracicoabdominal ganglion3 ± 10 of 4 0.00None
Salivary gland9 ± 10 of 4 0.01None
Crop4 ± 10 of 4 0.00None
Midgut3 ± 10 of 4 0.00None
Tubule3 ± 00 of 4 0.00Down
Hindgut5 ± 10 of 4 0.00None
Heart2 ± 10 of 4 0.00None
Fat body5 ± 30 of 4 0.01None
Ovary4 ± 21 of 4 0.00None
Testis40 ± 144 of 4 0.10None
Male accessory glands11566 ± 3484 of 416.00Up
Virgin spermatheca0 ± 00 of 4 0.00None
Mated spermatheca3 ± 10 of 4 0.00None
Adult carcass75 ± 284 of 4 0.10None
Larval CNS3 ± 10 of 4 0.01None
Larval Salivary gland4 ± 10 of 4 0.01None
Larval midgut7 ± 10 of 4 0.01None
Larval tubule3 ± 00 of 4 0.00None
Larval hindgut1 ± 00 of 4 0.00None
Larval fat body5 ± 20 of 4 0.00None
Larval trachea4 ± 20 of 4 0.01None
Larval carcass1 ± 00 of 4 0.00None
S2 cells (growing)2 ± 00 of 4 0.00None
Whole fly723 ± 2744 of 4

Looking for FBgn0015586. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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