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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0015591 through 18771 annotations produced 1 hits



drostatin-A4 (Ast):

Annotation Number : CG13633
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015591
Gbrowse : chr3R:20586251-20590780 (-) // 100.0 //
Probeset : 1632752_at
Accessions : protein= NP_524489;, nucleotide= NM_079765;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0005102 // receptor binding // non-traceable author statement /// 0005179 // hormone activity // inferred from sequence
FlyMine data for FBgn0015591.
BDGP gene expression has embryonic in situ data for Ast: 14 pix of staining in 3 body parts.
TRiP has 1 RNAi stocks for FBgn0015591 available for purchase.
VDRC has 3 RNAi stocks for FBgn0015591 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain740 234 of 414.80Up
Head173 134 of 4 3.50Up
Eye19 04 of 4 0.39Down
Thoracicoabdominal ganglion1454 444 of 429.00Up
Salivary gland19 32 of 4 0.39Down
Crop14 64 of 4 0.30Down
Midgut195 114 of 4 3.90Up
Tubule14 33 of 4 0.30Down
Hindgut221 174 of 4 4.40Up
Heart7 13 of 4 0.14Down
Fat body27 144 of 4 0.55None
Ovary2 02 of 4 0.00Down
Testis6 03 of 4 0.10Down
Male accessory glands12 12 of 4 0.20Down
Virgin spermatheca23 24 of 4 0.48Down
Mated spermatheca22 44 of 4 0.45Down
Adult carcass47 74 of 4 0.90None
Larval CNS254 334 of 4 5.08Up
Larval Salivary gland13 24 of 4 0.26Down
Larval midgut200 164 of 4 4.00Up
Larval tubule10 22 of 4 0.20Down
Larval hindgut157 234 of 4 3.13Up
Larval fat body8 21 of 4 0.20Down
Larval trachea6 31 of 4 0.12Down
Larval carcass13 24 of 4 0.27Down
S2 cells (growing)28 14 of 4 0.57Down
Whole fly50 24 of 4

Looking for FBgn0015591. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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