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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0015926 through 18771 annotations produced 1 hits



chrX:15222378-15225035 (+) // 100.0 // (Apodystrophin):

Annotation Number : CG6157
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1628322_at
Accessions : protein= , nucleotide= NP_511162;
Pathway : "0000915 // cytokinesis
Interpro : actomyosin contractile ring assembly // non-traceable author statement /// 0007349 // cellularization // traceable auth
FlyMine data for full length.
Homophila reports that CG6157 is a close match (3e-14) to human gene D18S892E;DRP3;DTNA;LVNC1 (NP_116757), a gene associated with Left ventricular noncompaction with congenital heart defects, 606617 (3);Left ventricular noncompaction, familial isolated, 1, 604169 (3).
BioGrid reports that CG6157 interacts with CG8247 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 10 of 4 0.00Down
Head6 10 of 4 0.10Down
Eye5 10 of 4 0.04Down
Thoracicoabdominal ganglion6 20 of 4 0.10Down
Salivary gland6 10 of 4 0.06Down
Crop9 10 of 4 0.10Down
Midgut8 10 of 4 0.10Down
Tubule7 11 of 4 0.10Down
Hindgut6 10 of 4 0.10Down
Heart7 12 of 4 0.06Down
Fat body11 21 of 4 0.09Down
Ovary351 124 of 4 2.90Up
Testis2 00 of 4 0.00Down
Male accessory glands1 00 of 4 0.00Down
Virgin spermatheca9 11 of 4 0.07Down
Mated spermatheca6 10 of 4 0.05Down
Adult carcass10 31 of 4 0.10Down
Larval CNS46 24 of 4 0.38Down
Larval Salivary gland9 00 of 4 0.08Down
Larval midgut10 10 of 4 0.09Down
Larval tubule5 00 of 4 0.00Down
Larval hindgut7 02 of 4 0.06Down
Larval fat body7 20 of 4 0.10Down
Larval trachea24 04 of 4 0.20Down
Larval carcass13 12 of 4 0.11Down
S2 cells (growing)56 44 of 4 0.46Down
Whole fly123 124 of 4

Looking for FBgn0015926. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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