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FlyAtlas: the Drosophila gene expression atlas

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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0015929 through 18771 annotations produced 1 hits



Drosophila proliferation abnormal (dpa):

Annotation Number : CG1616
Flybase ID : FBgn0015929
Gbrowse : chr2R:3384205-3387379 (-) // 100.0 //
Probeset : 1629737_at
Accessions : protein= NP_477185;, nucleotide= NM_057837;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electro
FlyMine data for FBgn0015929.
BDGP gene expression has embryonic in situ data for dpa: 23 pix of staining in 21 body parts.
Homophila reports that CG1616 is a close match (1e-79) to human gene MCM6 (NP_005906), a gene associated with Lactase persistance/nonpersistance, 223100 (3);[Tall stature, susceptibility to], 606255 (3).
BioGrid reports that CG1616 interacts with CG18412 .
TRiP has 2 RNAi stocks for FBgn0015929 available for purchase.
VDRC has 2 RNAi stocks for FBgn0015929 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain13 00 of 4 0.00Down
Head13 20 of 4 0.00Down
Eye5 10 of 4 0.02Down
Thoracicoabdominal ganglion19 11 of 4 0.10Down
Salivary gland5 30 of 4 0.02Down
Crop11 20 of 4 0.00Down
Midgut11 30 of 4 0.00Down
Tubule11 30 of 4 0.00Down
Hindgut10 10 of 4 0.00Down
Heart6 10 of 4 0.02Down
Fat body10 20 of 4 0.04Down
Ovary598 124 of 4 2.10Up
Testis52 34 of 4 0.20Down
Male accessory glands16 10 of 4 0.10Down
Virgin spermatheca9 10 of 4 0.04Down
Mated spermatheca13 10 of 4 0.05Down
Adult carcass11 50 of 4 0.00Down
Larval CNS342 264 of 4 1.21Up
Larval Salivary gland152 74 of 4 0.54Down
Larval midgut15 30 of 4 0.06Down
Larval tubule18 21 of 4 0.10Down
Larval hindgut61 54 of 4 0.22Down
Larval fat body32 14 of 4 0.10Down
Larval trachea91 214 of 4 0.33Down
Larval carcass71 54 of 4 0.25Down
S2 cells (growing)173 84 of 4 0.62Down
Whole fly282 144 of 4

Looking for FBgn0015929. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime