FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0016054 through 18771 annotations produced 1 hits

photolyase (phr6-4):

Annotation Number : CG2488
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016054
Gbrowse : chr2L:20643347-20645789 (-) // 100.0 //
Probeset : 1635020_s_at
Accessions : protein= NP_477188; /// NP_724274;, nucleotide= NM_057840; /// NM_165334;
Interpro : 0003913 // DNA photolyase activity // inferred from electronic annotation /// 0003914 // DNA (6-4) photolyase activity /
FlyMine data for FBgn0016054.
BDGP gene expression has embryonic in situ data for phr6-4: 12 pix of staining in 9 body parts.
TRiP has 1 RNAi stocks for FBgn0016054 available for purchase.
VDRC has 2 RNAi stocks for FBgn0016054 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	13 ± 2	0 of 4	0.20	Down
Head	8 ± 0	0 of 4	0.10	Down
Eye	8 ± 2	0 of 4	0.15	Down
Thoracicoabdominal ganglion	23 ± 5	2 of 4	0.40	Down
Salivary gland	20 ± 3	0 of 4	0.35	Down
Crop	11 ± 3	0 of 4	0.20	Down
Midgut	10 ± 4	0 of 4	0.20	Down
Tubule	8 ± 1	0 of 4	0.10	Down
Hindgut	9 ± 2	0 of 4	0.20	Down
Heart	12 ± 1	2 of 4	0.21	Down
Fat body	20 ± 5	0 of 4	0.36	Down
Ovary	68 ± 7	4 of 4	1.20	None
Testis	147 ± 13	4 of 4	2.60	Up
Male accessory glands	14 ± 4	0 of 4	0.30	Down
Virgin spermatheca	16 ± 2	0 of 4	0.29	Down
Mated spermatheca	15 ± 2	0 of 4	0.28	Down
Adult carcass	21 ± 2	0 of 4	0.40	Down
Larval CNS	53 ± 7	4 of 4	0.94	None
Larval Salivary gland	18 ± 4	0 of 4	0.32	Down
Larval midgut	14 ± 2	0 of 4	0.26	Down
Larval tubule	9 ± 1	0 of 4	0.20	Down
Larval hindgut	29 ± 1	4 of 4	0.51	None
Larval fat body	22 ± 1	1 of 4	0.40	None
Larval trachea	28 ± 6	4 of 4	0.50	None
Larval carcass	24 ± 1	4 of 4	0.42	None
S2 cells (growing)	69 ± 3	4 of 4	1.20	None
Whole fly	57 ± 11	3 of 4

Looking for FBgn0016054. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720