Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0016081 through 18771 annotations produced 2 hits



Suppressor of GMR-sina 3-7 (fry):

Annotation Number : CG32045
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016081
Gbrowse : chr3L:9624932-9671926 (-) // 100.0 //
Probeset : 1631579_a_at
Accessions : protein= NP_001036598; /// NP_729519; /// NP_729520;, nucleotide= NM_001043133; /// NM_168356; /// NM_168357;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0016081.
BioGrid reports that CG32045 interacts with CG9949 CG9949 .
VDRC has 3 RNAi stocks for FBgn0016081 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain271 ± 44 of 4 1.50Up
Head283 ± 184 of 4 1.60Up
Eye770 ± 864 of 4 4.26Up
Thoracicoabdominal ganglion336 ± 84 of 4 1.90Up
Salivary gland189 ± 124 of 4 1.05None
Crop388 ± 44 of 4 2.10Up
Midgut229 ± 44 of 4 1.30Up
Tubule97 ± 24 of 4 0.50Down
Hindgut712 ± 184 of 4 3.90Up
Heart241 ± 124 of 4 1.33Up
Fat body115 ± 174 of 4 0.64Down
Ovary212 ± 74 of 4 1.20Up
Testis192 ± 104 of 4 1.10None
Male accessory glands147 ± 64 of 4 0.80Down
Virgin spermatheca93 ± 64 of 4 0.52Down
Mated spermatheca94 ± 54 of 4 0.52Down
Adult carcass240 ± 64 of 4 1.30Up
Larval CNS247 ± 124 of 4 1.37Up
Larval Salivary gland118 ± 64 of 4 0.66Down
Larval midgut213 ± 104 of 4 1.18None
Larval tubule115 ± 84 of 4 0.60Down
Larval hindgut253 ± 54 of 4 1.40Up
Larval fat body201 ± 84 of 4 1.10None
Larval trachea169 ± 114 of 4 0.93None
Larval carcass258 ± 174 of 4 1.42Up
S2 cells (growing)679 ± 114 of 4 3.75Up
Whole fly181 ± 64 of 4



Suppressor of GMR-sina 3-7 (fry):

Annotation Number : CG32045
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016081
Gbrowse : chr3L:9653721-9671926 (-) // 100.0 //
Probeset : 1633132_a_at
Accessions : protein= NP_001036598; /// NP_729519; /// NP_729520;, nucleotide= NM_001043133; /// NM_168356; /// NM_168357;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0016081.
BioGrid reports that CG32045 interacts with CG9949 CG9949 .
VDRC has 3 RNAi stocks for FBgn0016081 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain18 ± 04 of 4 3.10Up
Head6 ± 11 of 4 1.10None
Eye5 ± 10 of 4 1.00None
Thoracicoabdominal ganglion15 ± 13 of 4 2.60Up
Salivary gland17 ± 40 of 4 2.92None
Crop8 ± 11 of 4 1.50None
Midgut10 ± 10 of 4 1.80Up
Tubule3 ± 00 of 4 0.60Down
Hindgut12 ± 10 of 4 2.10Up
Heart6 ± 00 of 4 1.15None
Fat body4 ± 50 of 4 0.82None
Ovary3 ± 10 of 4 0.60None
Testis24 ± 04 of 4 4.10Up
Male accessory glands1 ± 00 of 4 0.30Down
Virgin spermatheca5 ± 10 of 4 0.93None
Mated spermatheca3 ± 10 of 4 0.59None
Adult carcass8 ± 41 of 4 1.50None
Larval CNS7 ± 11 of 4 1.27None
Larval Salivary gland4 ± 10 of 4 0.74None
Larval midgut10 ± 10 of 4 1.81Up
Larval tubule3 ± 00 of 4 0.50None
Larval hindgut4 ± 10 of 4 0.80None
Larval fat body5 ± 20 of 4 1.00None
Larval trachea6 ± 10 of 4 1.09None
Larval carcass3 ± 10 of 4 0.59None
S2 cells (growing)30 ± 24 of 4 5.19Up
Whole fly5 ± 00 of 4

Looking for FBgn0016081. 2 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime