Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0016694 through 18771 annotations produced 1 hits



PAR-domain protein 1 (Pdp1):

Annotation Number : CG17888
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016694
Gbrowse : chr3L:7807434-7860472 (-) // 100.0 //
Probeset : 1627436_s_at
Accessions : protein= NP_729297; /// NP_729298; /// NP_729299; /// NP_729300; /// NP_729301; /// NP_729302; /// NP_729303;, nucleotide= NM_168233; /// NM_168234; /// NM_168235; /// NM_168236; /// NM_168237; /// NM_168238; /// NM_168239;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 00075
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus //
FlyMine data for FBgn0016694.
BioGrid reports that CG17888 interacts with CG14029 .
TRiP has 2 RNAi stocks for FBgn0016694 available for purchase.
VDRC has 3 RNAi stocks for FBgn0016694 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain871 394 of 4 7.70Up
Head382 224 of 4 3.40Up
Eye264 534 of 4 2.33None
Thoracicoabdominal ganglion929 794 of 4 8.20Up
Salivary gland147 124 of 4 1.29None
Crop185 94 of 4 1.60Up
Midgut84 54 of 4 0.70Down
Tubule106 144 of 4 0.90None
Hindgut259 84 of 4 2.30Up
Heart115 154 of 4 1.02None
Fat body254 274 of 4 2.24Up
Ovary24 14 of 4 0.20Down
Testis19 14 of 4 0.20Down
Male accessory glands91 54 of 4 0.80Down
Virgin spermatheca196 204 of 4 1.73Up
Mated spermatheca138 154 of 4 1.22None
Adult carcass202 204 of 4 1.80Up
Larval CNS114 164 of 4 1.01None
Larval Salivary gland25 54 of 4 0.23Down
Larval midgut63 64 of 4 0.56Down
Larval tubule26 34 of 4 0.20Down
Larval hindgut146 194 of 4 1.29None
Larval fat body13 13 of 4 0.10Down
Larval trachea29 84 of 4 0.26Down
Larval carcass49 54 of 4 0.43Down
S2 cells (growing)48 24 of 4 0.42Down
Whole fly113 34 of 4

Looking for FBgn0016694. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime