FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0016930 through 18771 annotations produced 1 hits

Dual specificity tyrosine phosphorylation-regulated kinase (smi35A):

Annotation Number : CG4551
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016930
Gbrowse : chr2L:14184469-14197873 (-) // 100.0 //
Probeset : 1625183_at
Accessions : protein= NP_001033906; /// NP_001033907; /// NP_523564; /// NP_995710; /// NP_995711;, nucleotide= NM_001038817; /// NM_001038818; /// NM_078840; /// NM_205988; /// NM_205989;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-trace
FlyMine data for FBgn0016930.
BDGP gene expression has embryonic in situ data for smi35A: 28 pix of staining in 9 body parts.
Homophila reports that CG4551 is a close match (6e-13) to human gene (NP_002746), a gene associated with .
TRiP has 2 RNAi stocks for FBgn0016930 available for purchase.
VDRC has 3 RNAi stocks for FBgn0016930 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	437 ± 26	4 of 4	8.50	Up
Head	225 ± 27	4 of 4	4.40	Up
Eye	317 ± 76	4 of 4	6.15	Up
Thoracicoabdominal ganglion	457 ± 12	4 of 4	8.90	Up
Salivary gland	118 ± 10	4 of 4	2.30	Up
Crop	129 ± 12	4 of 4	2.50	Up
Midgut	68 ± 3	4 of 4	1.30	Up
Tubule	22 ± 1	4 of 4	0.40	Down
Hindgut	45 ± 2	4 of 4	0.90	None
Heart	109 ± 2	4 of 4	2.12	Up
Fat body	25 ± 3	4 of 4	0.49	Down
Ovary	54 ± 2	4 of 4	1.10	None
Testis	54 ± 2	4 of 4	1.10	None
Male accessory glands	34 ± 2	4 of 4	0.70	Down
Virgin spermatheca	39 ± 1	4 of 4	0.77	None
Mated spermatheca	43 ± 5	4 of 4	0.84	None
Adult carcass	43 ± 1	4 of 4	0.80	None
Larval CNS	410 ± 55	4 of 4	7.97	Up
Larval Salivary gland	17 ± 3	4 of 4	0.34	Down
Larval midgut	47 ± 3	4 of 4	0.92	None
Larval tubule	12 ± 2	4 of 4	0.20	Down
Larval hindgut	30 ± 2	4 of 4	0.60	Down
Larval fat body	94 ± 24	4 of 4	1.80	None
Larval trachea	79 ± 17	4 of 4	1.54	Up
Larval carcass	96 ± 50	4 of 4	1.87	None
S2 cells (growing)	239 ± 14	4 of 4	4.64	Up
Whole fly	51 ± 5	4 of 4

Looking for FBgn0016930. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720