FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0019948 through 18771 annotations produced 2 hits

Peptidyl gycine alpha hydroxylating monooxygenase (Phm):

Annotation Number : CG3832
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0019948
Gbrowse : chr2R:19872749-19875990 (-) // 100.0 //
Probeset : 1623430_at
Accessions : protein= NP_477225; /// NP_726394;, nucleotide= NM_057877; /// NM_166644;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electron
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred f
FlyMine data for FBgn0019948.
BDGP gene expression has embryonic in situ data for Phm: 15 pix of staining in 6 body parts.
Homophila reports that CG3832 is a close match (7e-11) to human gene DBH (NP_000778), a gene associated with Dopamine beta-hydroxylase deficiency, 223360 (3);Parkinson disease, resistance to, 168600 (3);[Dopamine-beta-hydroxylase activity levels, plasma] (3).
BioGrid reports that CG3832 interacts with CG9986 .
VDRC has 3 RNAi stocks for FBgn0019948 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	94 ± 3	4 of 4	2.30	Up
Head	70 ± 2	4 of 4	1.80	Up
Eye	147 ± 5	4 of 4	3.67	Up
Thoracicoabdominal ganglion	85 ± 3	4 of 4	2.10	Up
Salivary gland	75 ± 12	4 of 4	1.89	None
Crop	87 ± 6	4 of 4	2.20	Up
Midgut	27 ± 2	4 of 4	0.70	Down
Tubule	58 ± 2	4 of 4	1.50	Up
Hindgut	74 ± 1	4 of 4	1.90	Up
Heart	123 ± 7	4 of 4	3.09	Up
Fat body	54 ± 6	4 of 4	1.35	Up
Ovary	42 ± 1	4 of 4	1.10	None
Testis	16 ± 1	4 of 4	0.40	Down
Male accessory glands	92 ± 7	4 of 4	2.30	Up
Virgin spermatheca	122 ± 5	4 of 4	3.05	Up
Mated spermatheca	126 ± 4	4 of 4	3.16	Up
Adult carcass	48 ± 2	4 of 4	1.20	None
Larval CNS	81 ± 11	4 of 4	2.02	Up
Larval Salivary gland	115 ± 4	4 of 4	2.88	Up
Larval midgut	29 ± 2	4 of 4	0.74	Down
Larval tubule	34 ± 1	4 of 4	0.90	None
Larval hindgut	46 ± 3	4 of 4	1.15	None
Larval fat body	69 ± 6	4 of 4	1.70	Up
Larval trachea	121 ± 5	4 of 4	3.03	Up
Larval carcass	52 ± 2	4 of 4	1.31	Up
S2 cells (growing)	205 ± 6	4 of 4	5.13	Up
Whole fly	40 ± 2	4 of 4

Peptidyl gycine alpha hydroxylating monooxygenase (Phm):

Annotation Number : CG3832
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0019948
Gbrowse : chr2R:19872854-19875990 (-) // 100.0 //
Probeset : 1631675_a_at
Accessions : protein= NP_477225; /// NP_726394;, nucleotide= NM_057877; /// NM_166644;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electron
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred f
FlyMine data for FBgn0019948.
BDGP gene expression has embryonic in situ data for Phm: 15 pix of staining in 6 body parts.
Homophila reports that CG3832 is a close match (7e-11) to human gene DBH (NP_000778), a gene associated with Dopamine beta-hydroxylase deficiency, 223360 (3);Parkinson disease, resistance to, 168600 (3);[Dopamine-beta-hydroxylase activity levels, plasma] (3).
BioGrid reports that CG3832 interacts with CG9986 .
VDRC has 3 RNAi stocks for FBgn0019948 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1059 ± 15	4 of 4	3.10	Up
Head	1159 ± 34	4 of 4	3.40	Up
Eye	2451 ± 27	4 of 4	7.29	Up
Thoracicoabdominal ganglion	893 ± 28	4 of 4	2.70	Up
Salivary gland	3686 ± 75	4 of 4	10.96	Up
Crop	762 ± 28	4 of 4	2.30	Up
Midgut	372 ± 15	4 of 4	1.10	None
Tubule	456 ± 31	4 of 4	1.40	Up
Hindgut	877 ± 14	4 of 4	2.60	Up
Heart	818 ± 26	4 of 4	2.43	Up
Fat body	878 ± 82	4 of 4	2.61	Up
Ovary	198 ± 3	4 of 4	0.60	Down
Testis	297 ± 4	4 of 4	0.90	None
Male accessory glands	1611 ± 49	4 of 4	4.80	Up
Virgin spermatheca	972 ± 24	4 of 4	2.89	Up
Mated spermatheca	903 ± 39	4 of 4	2.69	Up
Adult carcass	671 ± 31	4 of 4	2.00	Up
Larval CNS	524 ± 29	4 of 4	1.56	Up
Larval Salivary gland	1620 ± 55	4 of 4	4.82	Up
Larval midgut	274 ± 8	4 of 4	0.82	Down
Larval tubule	392 ± 22	4 of 4	1.20	None
Larval hindgut	556 ± 15	4 of 4	1.65	Up
Larval fat body	968 ± 75	4 of 4	2.90	Up
Larval trachea	724 ± 63	4 of 4	2.15	Up
Larval carcass	476 ± 9	4 of 4	1.42	Up
S2 cells (growing)	1330 ± 38	4 of 4	3.95	Up
Whole fly	336 ± 18	4 of 4

Looking for FBgn0019948. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720