FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0019957 through 18771 annotations produced 1 hits

NADH-ubiquinone oxidoreductase subunit (ND42):

Annotation Number : CG6343
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0019957
Gbrowse : chr3R:17853507-17855109 (+) // 100.0 //
Probeset : 1639585_a_at
Accessions : protein= NP_524445; /// NP_732692;, nucleotide= NM_079721; /// NM_169990;
Pathway : NADH to ubiquinone // inferred from sequence or structural similarity /// 0006139 // nucleobase
Interpro : nucleoside
FlyMine data for FBgn0019957.
BDGP gene expression has embryonic in situ data for ND42: 12 pix of staining in 18 body parts.
BioGrid reports that CG6343 interacts with CG9902 .
TRiP has 3 RNAi stocks for FBgn0019957 available for purchase.
VDRC has 2 RNAi stocks for FBgn0019957 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1094 ± 25	4 of 4	1.00	None
Head	1279 ± 37	4 of 4	1.20	Up
Eye	1564 ± 37	4 of 4	1.41	Up
Thoracicoabdominal ganglion	1526 ± 31	4 of 4	1.40	Up
Salivary gland	1536 ± 45	4 of 4	1.39	Up
Crop	890 ± 18	4 of 4	0.80	Down
Midgut	1261 ± 36	4 of 4	1.10	Up
Tubule	2183 ± 74	4 of 4	2.00	Up
Hindgut	1673 ± 40	4 of 4	1.50	Up
Heart	1617 ± 67	4 of 4	1.46	Up
Fat body	1500 ± 189	4 of 4	1.35	Up
Ovary	607 ± 6	4 of 4	0.50	Down
Testis	695 ± 18	4 of 4	0.60	Down
Male accessory glands	862 ± 40	4 of 4	0.80	Down
Virgin spermatheca	1963 ± 66	4 of 4	1.77	Up
Mated spermatheca	1827 ± 83	4 of 4	1.65	Up
Adult carcass	2414 ± 105	4 of 4	2.20	Up
Larval CNS	626 ± 46	4 of 4	0.57	Down
Larval Salivary gland	748 ± 38	4 of 4	0.68	Down
Larval midgut	1566 ± 71	4 of 4	1.41	Up
Larval tubule	816 ± 74	4 of 4	0.70	Down
Larval hindgut	1385 ± 57	4 of 4	1.25	Up
Larval fat body	505 ± 19	4 of 4	0.50	Down
Larval trachea	818 ± 43	4 of 4	0.74	Down
Larval carcass	1279 ± 131	4 of 4	1.16	None
S2 cells (growing)	527 ± 12	4 of 4	0.48	Down
Whole fly	1107 ± 32	4 of 4

Looking for FBgn0019957. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720