FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0020249 through 18771 annotations produced 1 hits

PINCH (stck):

Annotation Number : CG7954
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020249
Gbrowse : chr3R:4182688-4185745 (+) // 100.0 //
Probeset : 1625223_a_at
Accessions : protein= NP_524278; /// NP_731241; /// NP_731242;, nucleotide= NM_079554; /// NM_169220; /// NM_169221;
Pathway : 0031252 // cell leading edge // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0020249.
BDGP gene expression has embryonic in situ data for stck: 24 pix of staining in 4 body parts.
Homophila reports that CG7954 is a close match (2e-15) to human gene FHL1;SLIM1;XMPMA (NP_001440), a gene associated with Myopathy, reducing body, X-linked, severe early-onset, 300717 (3), Myopathy, reducing body, X-linked, childhood-onset, 300718 (3);Myopathy, X-linked, with postural muscle atrophy, 300696 (3);Scapuloperoneal myopathy, X-linked dominant, 300695 (3).
BioGrid reports that CG7954 interacts with CG9031 CG8183 CG8292 CG9218 CG9238 CG1560 .
TRiP has 2 RNAi stocks for FBgn0020249 available for purchase.
VDRC has 3 RNAi stocks for FBgn0020249 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	494 ± 6	4 of 4	1.10	None
Head	620 ± 11	4 of 4	1.30	Up
Eye	771 ± 10	4 of 4	1.66	Up
Thoracicoabdominal ganglion	655 ± 24	4 of 4	1.40	Up
Salivary gland	744 ± 51	4 of 4	1.60	Up
Crop	2262 ± 43	4 of 4	4.90	Up
Midgut	759 ± 14	4 of 4	1.60	Up
Tubule	887 ± 12	4 of 4	1.90	Up
Hindgut	1145 ± 29	4 of 4	2.50	Up
Heart	1204 ± 31	4 of 4	2.59	Up
Fat body	592 ± 39	4 of 4	1.28	Up
Ovary	522 ± 9	4 of 4	1.10	None
Testis	182 ± 11	4 of 4	0.40	Down
Male accessory glands	650 ± 45	4 of 4	1.40	Up
Virgin spermatheca	641 ± 26	4 of 4	1.38	Up
Mated spermatheca	768 ± 26	4 of 4	1.65	Up
Adult carcass	749 ± 27	4 of 4	1.60	Up
Larval CNS	466 ± 26	4 of 4	1.00	None
Larval Salivary gland	1129 ± 55	4 of 4	2.43	Up
Larval midgut	763 ± 13	4 of 4	1.64	Up
Larval tubule	846 ± 19	4 of 4	1.80	Up
Larval hindgut	1311 ± 14	4 of 4	2.82	Up
Larval fat body	380 ± 22	4 of 4	0.80	None
Larval trachea	1268 ± 46	4 of 4	2.73	Up
Larval carcass	1332 ± 53	4 of 4	2.87	Up
S2 cells (growing)	1090 ± 54	4 of 4	2.35	Up
Whole fly	464 ± 28	4 of 4

Looking for FBgn0020249. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720