Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0020269 through 18771 annotations produced 1 hits



m-spondin (mspo):

Annotation Number : CG10145
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020269
Gbrowse : chr2R:10559443-10601126 (-) // 99.85 //
Probeset : 1631327_at
Accessions : protein= NP_725407;, nucleotide= NM_166063;
Pathway : 0005578 // proteinaceous extracellular matrix // non-traceable author statement
FlyMine data for FBgn0020269.
BDGP gene expression has embryonic in situ data for mspo: 45 pix of staining in 13 body parts.
BioGrid reports that CG10145 interacts with CG11678 .
TRiP has 1 RNAi stocks for FBgn0020269 available for purchase.
VDRC has 2 RNAi stocks for FBgn0020269 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain237 ± 34 of 421.90Up
Head48 ± 34 of 4 4.50Up
Eye75 ± 114 of 4 6.93Up
Thoracicoabdominal ganglion158 ± 94 of 414.60Up
Salivary gland9 ± 20 of 4 0.91None
Crop31 ± 34 of 4 2.90Up
Midgut4 ± 20 of 4 0.40None
Tubule6 ± 10 of 4 0.60Down
Hindgut18 ± 13 of 4 1.70Up
Heart12 ± 21 of 4 1.14None
Fat body11 ± 60 of 4 1.08None
Ovary1 ± 00 of 4 0.10Down
Testis1 ± 00 of 4 0.10Down
Male accessory glands21 ± 20 of 4 2.00Up
Virgin spermatheca17 ± 11 of 4 1.61None
Mated spermatheca19 ± 23 of 4 1.79Up
Adult carcass31 ± 24 of 4 2.90Up
Larval CNS111 ± 54 of 410.31Up
Larval Salivary gland17 ± 30 of 4 1.64None
Larval midgut2 ± 00 of 4 0.26Down
Larval tubule4 ± 10 of 4 0.40None
Larval hindgut34 ± 54 of 4 3.20Up
Larval fat body4 ± 10 of 4 0.40None
Larval trachea4 ± 40 of 4 0.42None
Larval carcass44 ± 34 of 4 4.08Up
S2 cells (growing)34 ± 24 of 4 3.22Up
Whole fly10 ± 22 of 4

Looking for FBgn0020269. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime