Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0020280 through 18771 annotations produced 1 hits



labial associated factor (laf):

Annotation Number : CG14660
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020280
Gbrowse : chr3R:701726-704255 (-) // 100.0 //
Probeset : 1637136_at
Accessions : protein= NP_649504;, nucleotide= NM_141247;
Pathway : 0005634 // nucleus // non-traceable author statement
FlyMine data for FBgn0020280.
VDRC has 3 RNAi stocks for FBgn0020280 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head4 ± 10 of 4 0.20Down
Eye1 ± 00 of 4 0.08Down
Thoracicoabdominal ganglion3 ± 10 of 4 0.10Down
Salivary gland21 ± 32 of 4 1.00None
Crop3 ± 10 of 4 0.10Down
Midgut5 ± 10 of 4 0.20Down
Tubule7 ± 10 of 4 0.30Down
Hindgut8 ± 20 of 4 0.40Down
Heart2 ± 10 of 4 0.13Down
Fat body5 ± 40 of 4 0.27Down
Ovary3 ± 10 of 4 0.20Down
Testis162 ± 34 of 4 7.50Up
Male accessory glands9 ± 21 of 4 0.40Down
Virgin spermatheca6 ± 10 of 4 0.29Down
Mated spermatheca6 ± 20 of 4 0.30Down
Adult carcass4 ± 10 of 4 0.20Down
Larval CNS2 ± 10 of 4 0.12Down
Larval Salivary gland7 ± 20 of 4 0.34Down
Larval midgut11 ± 30 of 4 0.52None
Larval tubule8 ± 20 of 4 0.40Down
Larval hindgut4 ± 10 of 4 0.20Down
Larval fat body28 ± 141 of 4 1.30None
Larval trachea3 ± 30 of 4 0.14Down
Larval carcass3 ± 10 of 4 0.16Down
S2 cells (growing)5 ± 10 of 4 0.24Down
Whole fly21 ± 33 of 4

Looking for FBgn0020280. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime