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FlyAtlas: the Drosophila gene expression atlas

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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0020371 through 18771 annotations produced 3 hits



Translocase inner membrane 17 (Tim17b2):

Annotation Number : CG15257
Flybase ID : FBgn0020371
Gbrowse : chr2L:15484767-15485490 (+) // 100.0 //
Probeset : 1638375_at
Accessions : protein= NP_524746; /// NP_788070;, nucleotide= NM_080007; /// NM_176056;
Pathway : 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membra
Interpro : 0008565 // protein transporter activity // inferred from electronic annotation /// 0008566 // mitochondrial protein-tran
FlyMine data for FBgn0020371.
VDRC has 2 RNAi stocks for FBgn0020371 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 02 of 4 0.00Down
Head2 01 of 4 0.00Down
Eye3 10 of 4 0.02Down
Thoracicoabdominal ganglion3 10 of 4 0.00Down
Salivary gland3 10 of 4 0.02Down
Crop3 00 of 4 0.00Down
Midgut3 10 of 4 0.00Down
Tubule2 00 of 4 0.00Down
Hindgut1 00 of 4 0.00Down
Heart2 00 of 4 0.01Down
Fat body2 10 of 4 0.01Down
Ovary2 01 of 4 0.00Down
Testis1472 164 of 4 7.60Up
Male accessory glands2 10 of 4 0.00Down
Virgin spermatheca1 00 of 4 0.01Down
Mated spermatheca2 00 of 4 0.01Down
Adult carcass5 21 of 4 0.00Down
Larval CNS1 21 of 4 0.01Down
Larval Salivary gland1 00 of 4 0.01Down
Larval midgut3 00 of 4 0.02Down
Larval tubule2 00 of 4 0.00Down
Larval hindgut2 01 of 4 0.01Down
Larval fat body257 1394 of 4 1.30None
Larval trachea8 101 of 4 0.04Down
Larval carcass3 02 of 4 0.02Down
S2 cells (growing)1 00 of 4 0.01Down
Whole fly193 204 of 4



Translocase inner membrane 17 (Tim17b2):

Annotation Number : CG15257
Flybase ID : FBgn0020371
Gbrowse : chr2L:15484767-15494204 (+) // 100.0 //
Probeset : 1628280_at
Accessions : protein= NP_524746; /// NP_788070;, nucleotide= NM_080007; /// NM_176056;
Pathway : 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membra
Interpro : 0008565 // protein transporter activity // inferred from electronic annotation /// 0008566 // mitochondrial protein-tran
FlyMine data for FBgn0020371.
VDRC has 2 RNAi stocks for FBgn0020371 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 1.20None
Head0 00 of 4 0.90None
Eye0 00 of 4 0.70None
Thoracicoabdominal ganglion1 00 of 4 1.60None
Salivary gland4 10 of 4 6.15None
Crop0 00 of 4 1.30None
Midgut0 00 of 4 1.20None
Tubule1 00 of 4 2.20Up
Hindgut0 00 of 4 0.60None
Heart0 00 of 4 0.67None
Fat body1 00 of 4 1.59None
Ovary0 00 of 4 1.00None
Testis2 00 of 4 2.90None
Male accessory glands1 00 of 4 2.10None
Virgin spermatheca1 00 of 4 1.96None
Mated spermatheca2 00 of 4 3.07None
Adult carcass2 10 of 4 3.90None
Larval CNS1 00 of 4 1.56None
Larval Salivary gland1 00 of 4 2.41None
Larval midgut0 00 of 4 1.37None
Larval tubule1 00 of 4 2.20None
Larval hindgut0 00 of 4 1.19None
Larval fat body1 00 of 4 2.90None
Larval trachea1 10 of 4 1.67None
Larval carcass1 00 of 4 2.52None
S2 cells (growing)1 10 of 4 2.11None
Whole fly0 00 of 4



Translocase inner membrane 17 (Tim17b2):

Annotation Number : CG15257
Flybase ID : FBgn0020371
Gbrowse : chr2L:15484767-15485490 (+) // 100.0 //
Probeset : 1635155_a_at
Accessions : protein= NP_524746; /// NP_788070;, nucleotide= NM_080007; /// NM_176056;
Pathway : 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membra
Interpro : 0008565 // protein transporter activity // inferred from electronic annotation /// 0008566 // mitochondrial protein-tran
FlyMine data for FBgn0020371.
VDRC has 2 RNAi stocks for FBgn0020371 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.00Down
Head0 00 of 4 0.00Down
Eye1 00 of 4 0.01Down
Thoracicoabdominal ganglion1 00 of 4 0.00Down
Salivary gland4 10 of 4 0.04Down
Crop3 10 of 4 0.00Down
Midgut1 00 of 4 0.00Down
Tubule1 00 of 4 0.00Down
Hindgut0 00 of 4 0.00Down
Heart0 00 of 4 0.01Down
Fat body0 00 of 4 0.01Down
Ovary1 00 of 4 0.00Down
Testis1402 524 of 412.80Up
Male accessory glands1 00 of 4 0.00Down
Virgin spermatheca0 00 of 4 0.01Down
Mated spermatheca3 10 of 4 0.04Down
Adult carcass2 00 of 4 0.00Down
Larval CNS1 00 of 4 0.01Down
Larval Salivary gland3 10 of 4 0.03Down
Larval midgut3 10 of 4 0.03Down
Larval tubule1 00 of 4 0.00Down
Larval hindgut1 00 of 4 0.01Down
Larval fat body191 1123 of 4 1.70None
Larval trachea5 71 of 4 0.05Down
Larval carcass4 10 of 4 0.04Down
S2 cells (growing)0 00 of 4 0.01Down
Whole fly110 14 of 4

Looking for FBgn0020371. 3 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime