FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0020379 through 18771 annotations produced 1 hits

Regulatory factor X (Rfx):

Annotation Number : CG6312
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020379
Gbrowse : chr3R:6188232-6203790 (-) // 100.0 //
Probeset : 1628783_at
Accessions : protein= NP_001097738; /// NP_649999;, nucleotide= NM_001104268; /// NM_141742;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant
Interpro : 0005634 // nucleus // non-traceable author statement
FlyMine data for FBgn0020379.
TRiP has 1 RNAi stocks for FBgn0020379 available for purchase.
VDRC has 1 RNAi stocks for FBgn0020379 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	66 ± 5	4 of 4	3.80	Up
Head	19 ± 3	2 of 4	1.10	None
Eye	18 ± 0	4 of 4	1.09	None
Thoracicoabdominal ganglion	15 ± 2	1 of 4	0.90	None
Salivary gland	11 ± 4	0 of 4	0.65	None
Crop	5 ± 2	0 of 4	0.30	Down
Midgut	3 ± 1	0 of 4	0.20	Down
Tubule	6 ± 1	0 of 4	0.40	Down
Hindgut	7 ± 3	0 of 4	0.40	None
Heart	6 ± 2	2 of 4	0.38	Down
Fat body	8 ± 3	0 of 4	0.50	Down
Ovary	28 ± 1	4 of 4	1.70	Up
Testis	29 ± 4	4 of 4	1.70	None
Male accessory glands	2 ± 0	0 of 4	0.10	Down
Virgin spermatheca	1 ± 0	0 of 4	0.06	Down
Mated spermatheca	0 ± 0	0 of 4	0.04	Down
Adult carcass	11 ± 1	0 of 4	0.60	Down
Larval CNS	36 ± 3	4 of 4	2.12	Up
Larval Salivary gland	5 ± 2	0 of 4	0.34	Down
Larval midgut	3 ± 0	0 of 4	0.18	Down
Larval tubule	10 ± 2	1 of 4	0.60	None
Larval hindgut	2 ± 1	0 of 4	0.17	Down
Larval fat body	6 ± 3	0 of 4	0.40	Down
Larval trachea	4 ± 2	0 of 4	0.26	Down
Larval carcass	2 ± 0	0 of 4	0.12	Down
S2 cells (growing)	8 ± 0	0 of 4	0.47	Down
Whole fly	17 ± 1	3 of 4

Looking for FBgn0020379. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720