FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0020388 through 18771 annotations produced 1 hits

Pcaf (Pcaf):

Annotation Number : CG4107
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020388
Gbrowse : chr3L:12514177-12517101 (-) // 100.0 //
Probeset : 1627246_at
Accessions : protein= NP_648586;, nucleotide= NM_140329;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007412 // axon target recognition // inferred from mutant phe
Interpro : 0000124 // SAGA complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from elect
FlyMine data for FBgn0020388.
BDGP gene expression has embryonic in situ data for Pcaf: 30 pix of staining in 17 body parts.
BioGrid reports that CG4107 interacts with CG9638 .
TRiP has 2 RNAi stocks for FBgn0020388 available for purchase.
VDRC has 3 RNAi stocks for FBgn0020388 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	129 ± 8	4 of 4	1.00	None
Head	98 ± 2	4 of 4	0.80	Down
Eye	70 ± 5	4 of 4	0.55	Down
Thoracicoabdominal ganglion	127 ± 2	4 of 4	1.00	None
Salivary gland	62 ± 3	4 of 4	0.50	Down
Crop	106 ± 1	4 of 4	0.80	Down
Midgut	98 ± 10	4 of 4	0.80	None
Tubule	126 ± 7	4 of 4	1.00	None
Hindgut	99 ± 5	4 of 4	0.80	Down
Heart	119 ± 7	4 of 4	0.94	None
Fat body	162 ± 24	4 of 4	1.28	None
Ovary	244 ± 5	4 of 4	1.90	Up
Testis	29 ± 1	4 of 4	0.20	Down
Male accessory glands	112 ± 6	4 of 4	0.90	None
Virgin spermatheca	242 ± 13	4 of 4	1.92	Up
Mated spermatheca	242 ± 7	4 of 4	1.92	Up
Adult carcass	121 ± 10	4 of 4	1.00	None
Larval CNS	193 ± 3	4 of 4	1.53	Up
Larval Salivary gland	90 ± 6	4 of 4	0.72	Down
Larval midgut	122 ± 6	4 of 4	0.97	None
Larval tubule	164 ± 11	4 of 4	1.30	Up
Larval hindgut	98 ± 6	4 of 4	0.78	Down
Larval fat body	118 ± 10	4 of 4	0.90	None
Larval trachea	127 ± 12	4 of 4	1.01	None
Larval carcass	96 ± 4	4 of 4	0.76	Down
S2 cells (growing)	167 ± 6	4 of 4	1.32	Up
Whole fly	126 ± 3	4 of 4

Looking for FBgn0020388. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720