FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0020412 through 18771 annotations produced 1 hits

Suppressor of variegation 3-1 (JIL-1):

Annotation Number : CG6297
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020412
Gbrowse : chr3L:11071853-11086239 (-) // 100.0 //
Probeset : 1641021_a_at
Accessions : protein= NP_648432; /// NP_729661;, nucleotide= NM_140175; /// NM_168439;
Pathway : "0000228 // nuclear chromosome // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from direct as
Interpro : transcription activating // inferred from physical interaction"
FlyMine data for FBgn0020412.
Homophila reports that CG6297 is a close match (6e-11) to human gene LYK5;PMSE (NP_001003787), a gene associated with Polyhydramnios, megalencephaly, and symptomatic epilepsy, 611087 (3).
BioGrid reports that CG6297 interacts with CG12052 .
TRiP has 3 RNAi stocks for FBgn0020412 available for purchase.
VDRC has 1 RNAi stocks for FBgn0020412 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	274 ± 10	4 of 4	9.70	Up
Head	94 ± 11	4 of 4	3.30	Up
Eye	83 ± 2	4 of 4	2.95	Up
Thoracicoabdominal ganglion	195 ± 8	4 of 4	6.90	Up
Salivary gland	55 ± 5	4 of 4	1.95	Up
Crop	52 ± 2	4 of 4	1.90	Up
Midgut	27 ± 3	4 of 4	1.00	None
Tubule	61 ± 1	4 of 4	2.20	Up
Hindgut	45 ± 1	4 of 4	1.60	Up
Heart	39 ± 2	4 of 4	1.40	None
Fat body	41 ± 5	4 of 4	1.46	None
Ovary	9 ± 0	4 of 4	0.30	Down
Testis	5 ± 0	4 of 4	0.20	Down
Male accessory glands	86 ± 1	4 of 4	3.00	Up
Virgin spermatheca	102 ± 10	4 of 4	3.61	Up
Mated spermatheca	102 ± 3	4 of 4	3.61	Up
Adult carcass	30 ± 2	4 of 4	1.10	None
Larval CNS	222 ± 26	4 of 4	7.85	Up
Larval Salivary gland	184 ± 20	4 of 4	6.52	Up
Larval midgut	29 ± 0	4 of 4	1.05	None
Larval tubule	28 ± 2	4 of 4	1.00	None
Larval hindgut	41 ± 2	4 of 4	1.46	None
Larval fat body	40 ± 5	4 of 4	1.40	None
Larval trachea	32 ± 4	4 of 4	1.14	None
Larval carcass	110 ± 17	4 of 4	3.91	Up
S2 cells (growing)	63 ± 3	4 of 4	2.26	Up
Whole fly	28 ± 4	4 of 4

Looking for FBgn0020412. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720