FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0020496 through 18771 annotations produced 2 hits

C-terminal Binding Protein (CtBP):

Annotation Number : S.C3R001251
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020496
Gbrowse : chr3R:8850521-8851194 (+) // 100.0 //
Probeset : 1623869_at
Accessions : protein= NP_001014617; /// NP_524336; /// NP_731762; /// NP_731763; /// NP_731764;, nucleotide= NM_001014617; /// NM_079612; /// NM_169490; /// NM_169491; /// NM_169492;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 //
Interpro : "0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor ac
FlyMine data for FBgn0020496.
TRiP has 2 RNAi stocks for FBgn0020496 available for purchase.
VDRC has 3 RNAi stocks for FBgn0020496 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	54 ± 5	4 of 4	0.60	Down
Head	48 ± 4	2 of 4	0.60	Down
Eye	36 ± 1	2 of 4	0.42	Down
Thoracicoabdominal ganglion	49 ± 3	4 of 4	0.60	Down
Salivary gland	63 ± 3	1 of 4	0.72	Down
Crop	41 ± 1	3 of 4	0.50	Down
Midgut	86 ± 5	2 of 4	1.00	None
Tubule	27 ± 1	0 of 4	0.30	Down
Hindgut	37 ± 2	0 of 4	0.40	Down
Heart	40 ± 4	4 of 4	0.46	Down
Fat body	38 ± 9	2 of 4	0.44	Down
Ovary	57 ± 2	4 of 4	0.70	Down
Testis	6 ± 1	1 of 4	0.10	Down
Male accessory glands	59 ± 1	1 of 4	0.70	Down
Virgin spermatheca	24 ± 0	0 of 4	0.28	Down
Mated spermatheca	22 ± 4	0 of 4	0.26	Down
Adult carcass	42 ± 7	1 of 4	0.50	Down
Larval CNS	45 ± 4	4 of 4	0.52	Down
Larval Salivary gland	43 ± 5	1 of 4	0.50	Down
Larval midgut	44 ± 7	1 of 4	0.51	Down
Larval tubule	34 ± 2	0 of 4	0.40	Down
Larval hindgut	38 ± 2	2 of 4	0.44	Down
Larval fat body	24 ± 1	0 of 4	0.30	Down
Larval trachea	36 ± 8	3 of 4	0.42	Down
Larval carcass	35 ± 3	3 of 4	0.40	Down
S2 cells (growing)	85 ± 3	4 of 4	0.97	None
Whole fly	87 ± 7	4 of 4

C-terminal Binding Protein (CtBP):

Annotation Number : CG7583
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020496
Gbrowse : chr3R:8837387-8847461 (+) // 99.75 //
Probeset : 1623106_s_at
Accessions : protein= NP_001014617; /// NP_524336; /// NP_731762; /// NP_731763; /// NP_731764;, nucleotide= NM_001014617; /// NM_079612; /// NM_169490; /// NM_169491; /// NM_169492;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 //
Interpro : "0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor ac
FlyMine data for FBgn0020496.
Homophila reports that CG7583 is a close match (8e-16) to human gene GLXR;GRHPR (NP_036335), a gene associated with Hyperoxaluria, primary, type II, 260000 (3).
BioGrid reports that CG7583 interacts with CG7952 CG8524 CG9653 CG9242 CG9286 CG9908 CG8384 CG6494 CG6494 CG6494 CG5460 CG3978 CG1849 CG1856 CG1856 CG3936 CG3497 CG8384 CG3956 CG4717 .
TRiP has 2 RNAi stocks for FBgn0020496 available for purchase.
VDRC has 3 RNAi stocks for FBgn0020496 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	465 ± 5	4 of 4	2.20	Up
Head	186 ± 5	4 of 4	0.90	None
Eye	345 ± 15	4 of 4	1.66	Up
Thoracicoabdominal ganglion	406 ± 8	4 of 4	2.00	Up
Salivary gland	140 ± 30	3 of 4	0.68	None
Crop	278 ± 3	4 of 4	1.30	Up
Midgut	168 ± 8	4 of 4	0.80	Down
Tubule	104 ± 4	4 of 4	0.50	Down
Hindgut	196 ± 7	4 of 4	0.90	None
Heart	353 ± 13	4 of 4	1.70	Up
Fat body	161 ± 9	4 of 4	0.77	Down
Ovary	335 ± 4	4 of 4	1.60	Up
Testis	58 ± 2	4 of 4	0.30	Down
Male accessory glands	237 ± 13	4 of 4	1.10	None
Virgin spermatheca	111 ± 14	4 of 4	0.54	Down
Mated spermatheca	112 ± 3	4 of 4	0.54	Down
Adult carcass	198 ± 22	4 of 4	1.00	None
Larval CNS	614 ± 53	4 of 4	2.95	Up
Larval Salivary gland	245 ± 7	4 of 4	1.18	Up
Larval midgut	200 ± 8	4 of 4	0.96	None
Larval tubule	273 ± 11	4 of 4	1.30	Up
Larval hindgut	202 ± 4	4 of 4	0.97	None
Larval fat body	193 ± 14	4 of 4	0.90	None
Larval trachea	421 ± 30	4 of 4	2.03	Up
Larval carcass	202 ± 4	4 of 4	0.97	None
S2 cells (growing)	538 ± 13	4 of 4	2.59	Up
Whole fly	208 ± 6	4 of 4

Looking for FBgn0020496. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720