Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0020497 through 18771 annotations produced 1 hits



Exportin (emb):

Annotation Number : CG13387
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020497
Gbrowse : chr2L:8403574-8408853 (+) // 100.0 //
Probeset : 1622939_at
Accessions : protein= NP_723391;, nucleotide= NM_164818;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from mutant phenotype
Interpro : 0005049 // nuclear export signal receptor activity // inferred from sequence or structural similarity /// 0005049 // nuc
FlyMine data for FBgn0020497.
BDGP gene expression has embryonic in situ data for emb: 16 pix of staining in 12 body parts.
BioGrid reports that CG13387 interacts with CG14135 CG32654 CG5009 CG6819 .
TRiP has 2 RNAi stocks for FBgn0020497 available for purchase.
VDRC has 2 RNAi stocks for FBgn0020497 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain527 14 of 4 1.60Up
Head398 244 of 4 1.20None
Eye812 204 of 4 2.45Up
Thoracicoabdominal ganglion465 214 of 4 1.40Up
Salivary gland378 154 of 4 1.14None
Crop462 144 of 4 1.40Up
Midgut263 34 of 4 0.80Down
Tubule461 84 of 4 1.40Up
Hindgut376 94 of 4 1.10Up
Heart641 84 of 4 1.93Up
Fat body395 284 of 4 1.19Up
Ovary500 84 of 4 1.50Up
Testis80 24 of 4 0.20Down
Male accessory glands333 64 of 4 1.00None
Virgin spermatheca590 224 of 4 1.78Up
Mated spermatheca637 204 of 4 1.92Up
Adult carcass267 124 of 4 0.80Down
Larval CNS994 1144 of 4 3.00Up
Larval Salivary gland514 184 of 4 1.55Up
Larval midgut190 94 of 4 0.57Down
Larval tubule434 64 of 4 1.30Up
Larval hindgut472 204 of 4 1.42Up
Larval fat body283 234 of 4 0.90None
Larval trachea1096 284 of 4 3.31Up
Larval carcass409 204 of 4 1.24Up
S2 cells (growing)679 194 of 4 2.05Up
Whole fly331 144 of 4

Looking for FBgn0020497. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime