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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0020508 through 18771 annotations produced 1 hits



Antigen 5-related 2 (Ag5r2):

Annotation Number : CG9540
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020508
Gbrowse : chrX:14676984-14678075 (-) // 100.0 //
Probeset : 1629199_at
Accessions : protein= NP_524689;, nucleotide= NM_079950;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred f
FlyMine data for FBgn0020508.
VDRC has 2 RNAi stocks for FBgn0020508 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 00 of 4 0.00Down
Head6 00 of 4 0.00Down
Eye7 22 of 4 0.01Down
Thoracicoabdominal ganglion5 10 of 4 0.00Down
Salivary gland17 30 of 4 0.04Down
Crop12 11 of 4 0.00Down
Midgut3496 1824 of 4 7.00Up
Tubule4 10 of 4 0.00Down
Hindgut7 00 of 4 0.00Down
Heart8 00 of 4 0.02Down
Fat body10 31 of 4 0.02Down
Ovary6 20 of 4 0.00Down
Testis2 00 of 4 0.00Down
Male accessory glands9 20 of 4 0.00Down
Virgin spermatheca7 20 of 4 0.02Down
Mated spermatheca9 21 of 4 0.02Down
Adult carcass7 30 of 4 0.00Down
Larval CNS8 32 of 4 0.02Down
Larval Salivary gland14 60 of 4 0.03Down
Larval midgut5876 1814 of 411.73Up
Larval tubule2 00 of 4 0.00Down
Larval hindgut48 74 of 4 0.10Down
Larval fat body29 131 of 4 0.10Down
Larval trachea30 372 of 4 0.06Down
Larval carcass20 63 of 4 0.04Down
S2 cells (growing)5 20 of 4 0.01Down
Whole fly500 1314 of 4

Looking for FBgn0020508. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime