FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0020653 through 18771 annotations produced 1 hits

thioredoxin reductase (Trxr-1):

Annotation Number : CG2151
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020653
Gbrowse : chrX:8136516-8142072 (+) // 100.0 //
Probeset : 1641487_a_at
Accessions : protein= NP_511082; /// NP_727251; /// NP_727252;, nucleotide= NM_078527; /// NM_167149; /// NM_167150;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 000573
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0004362 // glutathione-disulfide reductase act
FlyMine data for FBgn0020653.
BDGP gene expression has embryonic in situ data for Trxr-1: 4 pix of staining in 1 body parts.
Homophila reports that CG2151 is a close match (2e-36) to human gene DLD;LAD;PHE3 (NP_000099), a gene associated with Leigh syndrome, 256000 (3);Maple syrup urine disease, type III, 248600 (3).
BioGrid reports that CG2151 interacts with CG31094 .
TRiP has 2 RNAi stocks for FBgn0020653 available for purchase.
VDRC has 4 RNAi stocks for FBgn0020653 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	617 ± 22	4 of 4	0.70	Down
Head	734 ± 35	4 of 4	0.90	None
Eye	598 ± 28	4 of 4	0.69	Down
Thoracicoabdominal ganglion	772 ± 17	4 of 4	0.90	None
Salivary gland	560 ± 27	4 of 4	0.65	Down
Crop	686 ± 20	4 of 4	0.80	None
Midgut	1359 ± 35	4 of 4	1.60	Up
Tubule	3422 ± 168	4 of 4	4.00	Up
Hindgut	942 ± 13	4 of 4	1.10	None
Heart	729 ± 25	4 of 4	0.85	None
Fat body	659 ± 78	4 of 4	0.76	Down
Ovary	898 ± 6	4 of 4	1.00	None
Testis	573 ± 22	4 of 4	0.70	Down
Male accessory glands	591 ± 24	4 of 4	0.70	Down
Virgin spermatheca	279 ± 11	4 of 4	0.32	Down
Mated spermatheca	300 ± 24	4 of 4	0.35	Down
Adult carcass	1056 ± 44	4 of 4	1.20	Up
Larval CNS	783 ± 31	4 of 4	0.91	None
Larval Salivary gland	781 ± 24	4 of 4	0.90	None
Larval midgut	964 ± 71	4 of 4	1.12	None
Larval tubule	1172 ± 79	4 of 4	1.40	Up
Larval hindgut	853 ± 19	4 of 4	0.99	None
Larval fat body	347 ± 18	4 of 4	0.40	Down
Larval trachea	776 ± 34	4 of 4	0.90	None
Larval carcass	870 ± 13	4 of 4	1.01	None
S2 cells (growing)	1202 ± 19	4 of 4	1.39	Up
Whole fly	863 ± 60	4 of 4

Looking for FBgn0020653. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720