FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0020912 through 18771 annotations produced 1 hits

Ptx1 (Ptx1):

Annotation Number : CG1447
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020912
Gbrowse : chr3R:26738609-26756404 (+) // 100.0 //
Probeset : 1640825_a_at
Accessions : protein= NP_001138130; /// NP_733410; /// NP_788770; /// NP_996314;, nucleotide= NM_001144658; /// NM_170531; /// NM_176593; /// NM_206591;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred fr
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from s
FlyMine data for FBgn0020912.
BDGP gene expression has embryonic in situ data for Ptx1: 35 pix of staining in 16 body parts.
Homophila reports that CG1447 is a close match (8e-11) to human gene HLXB9;HOXHB9;SCRA1 (NP_005506), a gene associated with Currarino syndrome, 176450 (3).
VDRC has 2 RNAi stocks for FBgn0020912 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	76 ± 2	4 of 4	1.60	Up
Head	20 ± 1	4 of 4	0.40	Down
Eye	4 ± 2	0 of 4	0.08	Down
Thoracicoabdominal ganglion	116 ± 7	4 of 4	2.40	Up
Salivary gland	23 ± 4	2 of 4	0.48	Down
Crop	10 ± 1	2 of 4	0.20	Down
Midgut	422 ± 9	4 of 4	8.60	Up
Tubule	1458 ± 60	4 of 4	29.60	Up
Hindgut	13 ± 1	3 of 4	0.30	Down
Heart	5 ± 2	0 of 4	0.11	Down
Fat body	24 ± 10	3 of 4	0.50	Down
Ovary	5 ± 0	0 of 4	0.10	Down
Testis	8 ± 2	3 of 4	0.20	Down
Male accessory glands	13 ± 0	0 of 4	0.30	Down
Virgin spermatheca	22 ± 1	4 of 4	0.45	Down
Mated spermatheca	21 ± 3	4 of 4	0.43	Down
Adult carcass	15 ± 4	1 of 4	0.30	Down
Larval CNS	154 ± 6	4 of 4	3.13	Up
Larval Salivary gland	11 ± 1	3 of 4	0.24	Down
Larval midgut	282 ± 24	4 of 4	5.74	Up
Larval tubule	1339 ± 35	4 of 4	27.20	Up
Larval hindgut	21 ± 1	4 of 4	0.43	Down
Larval fat body	13 ± 4	0 of 4	0.30	Down
Larval trachea	3 ± 2	0 of 4	0.08	Down
Larval carcass	73 ± 4	4 of 4	1.50	Up
S2 cells (growing)	6 ± 2	2 of 4	0.13	Down
Whole fly	49 ± 5	4 of 4

Looking for FBgn0020912. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720