FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0021906 through 18771 annotations produced 2 hits

Rieske iron-sulfur protein (RFeSP):

Annotation Number : CG7361
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0021906
Gbrowse : chr2L:1612685-1614182 (-) // 100.0 //
Probeset : 1641174_at
Accessions : protein= NP_524748; /// NP_722715;, nucleotide= NM_080009; /// NM_164426;
Pathway : ubiquinol to cytochrome c // inferred from sequence or structural similarity /// 0006810 // transport // inferred from
Interpro : 0005739 // mitochondrion // inferred from electronic annotation /// 0005750 // mitochondrial respiratory chain complex I
FlyMine data for FBgn0021906.
BDGP gene expression has embryonic in situ data for RFeSP: 16 pix of staining in 25 body parts.
BioGrid reports that CG7361 interacts with CG7809 CG9121 CG9930 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	90 ± 2	4 of 4	0.40	None
Head	199 ± 29	4 of 4	0.90	None
Eye	3 ± 1	0 of 4	0.02	Down
Thoracicoabdominal ganglion	166 ± 12	4 of 4	0.80	None
Salivary gland	136 ± 15	4 of 4	0.64	None
Crop	249 ± 10	4 of 4	1.20	None
Midgut	299 ± 17	4 of 4	1.40	None
Tubule	173 ± 25	4 of 4	0.80	None
Hindgut	304 ± 15	4 of 4	1.40	None
Heart	13 ± 2	2 of 4	0.06	Down
Fat body	28 ± 36	3 of 4	0.13	Down
Ovary	236 ± 8	4 of 4	1.10	None
Testis	52 ± 4	4 of 4	0.20	Down
Male accessory glands	54 ± 1	4 of 4	0.30	Down
Virgin spermatheca	281 ± 47	4 of 4	1.31	None
Mated spermatheca	240 ± 49	4 of 4	1.12	None
Adult carcass	645 ± 37	4 of 4	3.00	Up
Larval CNS	4 ± 1	2 of 4	0.02	Down
Larval Salivary gland	38 ± 18	3 of 4	0.18	Down
Larval midgut	7 ± 1	0 of 4	0.04	Down
Larval tubule	170 ± 23	4 of 4	0.80	None
Larval hindgut	6 ± 1	3 of 4	0.03	Down
Larval fat body	89 ± 10	4 of 4	0.40	None
Larval trachea	14 ± 11	2 of 4	0.07	Down
Larval carcass	4 ± 0	0 of 4	0.02	Down
S2 cells (growing)	7 ± 0	4 of 4	0.04	Down
Whole fly	214 ± 43	4 of 4

Rieske iron-sulfur protein (RFeSP):

Annotation Number : CG7361
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0021906
Gbrowse : chr2L:1612685-1614182 (-) // 100.0 //
Probeset : 1631856_a_at
Accessions : protein= NP_524748; /// NP_722715;, nucleotide= NM_080009; /// NM_164426;
Pathway : ubiquinol to cytochrome c // inferred from sequence or structural similarity /// 0006810 // transport // inferred from
Interpro : 0005739 // mitochondrion // inferred from electronic annotation /// 0005750 // mitochondrial respiratory chain complex I
FlyMine data for FBgn0021906.
BDGP gene expression has embryonic in situ data for RFeSP: 16 pix of staining in 25 body parts.
BioGrid reports that CG7361 interacts with CG7809 CG9121 CG9930 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	995 ± 25	4 of 4	1.00	None
Head	1134 ± 43	4 of 4	1.10	None
Eye	1184 ± 59	4 of 4	1.18	Up
Thoracicoabdominal ganglion	1407 ± 31	4 of 4	1.40	Up
Salivary gland	1962 ± 102	4 of 4	1.96	Up
Crop	1045 ± 46	4 of 4	1.00	None
Midgut	1243 ± 54	4 of 4	1.20	Up
Tubule	864 ± 23	4 of 4	0.90	Down
Hindgut	1698 ± 37	4 of 4	1.70	Up
Heart	1227 ± 49	4 of 4	1.22	Up
Fat body	1157 ± 78	4 of 4	1.15	Up
Ovary	474 ± 6	4 of 4	0.50	Down
Testis	416 ± 20	4 of 4	0.40	Down
Male accessory glands	725 ± 19	4 of 4	0.70	Down
Virgin spermatheca	1166 ± 42	4 of 4	1.16	Up
Mated spermatheca	1081 ± 40	4 of 4	1.08	None
Adult carcass	2788 ± 70	4 of 4	2.80	Up
Larval CNS	454 ± 17	4 of 4	0.45	Down
Larval Salivary gland	749 ± 23	4 of 4	0.75	Down
Larval midgut	965 ± 34	4 of 4	0.96	None
Larval tubule	740 ± 78	4 of 4	0.70	Down
Larval hindgut	1178 ± 50	4 of 4	1.18	Up
Larval fat body	382 ± 23	4 of 4	0.40	Down
Larval trachea	377 ± 29	4 of 4	0.38	Down
Larval carcass	1001 ± 80	4 of 4	1.00	None
S2 cells (growing)	683 ± 16	4 of 4	0.68	Down
Whole fly	1002 ± 34	4 of 4

Looking for FBgn0021906. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720