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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0022709 through 18771 annotations produced 1 hits



Adenylate kinase-1 (Adk1):

Annotation Number : CG17146
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0022709
Gbrowse : chr3L:12193495-12197182 (-) // 100.0 //
Probeset : 1631377_a_at
Accessions : protein= NP_524038; /// NP_729792;, nucleotide= NM_079314; /// NM_168493;
Pathway : nucleoside
Interpro : nucleotide and nucleic acid metabolic process // inferred from electronic annotation /// 0046034 // ATP metabolic proce
FlyMine data for FBgn0022709.
BDGP gene expression has embryonic in situ data for Adk1: 4 pix of staining in 1 body parts.
Homophila reports that CG17146 is a close match (9e-46) to human gene AK1 (NP_000467), a gene associated with Hemolytic anemia due to adenylate kinase deficiency (3).
TRiP has 1 RNAi stocks for FBgn0022709 available for purchase.
VDRC has 2 RNAi stocks for FBgn0022709 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain331 ± 234 of 4 1.70Up
Head301 ± 314 of 4 1.50Up
Eye132 ± 154 of 4 0.68Down
Thoracicoabdominal ganglion333 ± 54 of 4 1.70Up
Salivary gland17 ± 30 of 4 0.09Down
Crop756 ± 214 of 4 3.90Up
Midgut86 ± 34 of 4 0.40Down
Tubule18 ± 13 of 4 0.10Down
Hindgut595 ± 114 of 4 3.00Up
Heart581 ± 344 of 4 2.98Up
Fat body62 ± 74 of 4 0.32Down
Ovary43 ± 04 of 4 0.20Down
Testis400 ± 174 of 4 2.00Up
Male accessory glands212 ± 244 of 4 1.10None
Virgin spermatheca182 ± 94 of 4 0.93None
Mated spermatheca117 ± 104 of 4 0.60Down
Adult carcass475 ± 224 of 4 2.40Up
Larval CNS74 ± 84 of 4 0.38Down
Larval Salivary gland1 ± 00 of 4 0.01Down
Larval midgut47 ± 74 of 4 0.24Down
Larval tubule7 ± 11 of 4 0.00Down
Larval hindgut253 ± 224 of 4 1.30None
Larval fat body29 ± 111 of 4 0.10Down
Larval trachea98 ± 304 of 4 0.50Down
Larval carcass300 ± 464 of 4 1.54None
S2 cells (growing)64 ± 34 of 4 0.33Down
Whole fly195 ± 174 of 4

Looking for FBgn0022709. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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