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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0022710 through 18771 annotations produced 1 hits



adenylyl cyclase (Ac13E):

Annotation Number : CG9210
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0022710
Gbrowse : chrX:15405489-15416196 (-) // 99.89 //
Probeset : 1636219_at
Accessions : protein= NP_001014745; /// NP_477299;, nucleotide= NM_001014745; /// NM_057951;
Pathway : 0016021 // integral to membrane // not recorded
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferr
FlyMine data for FBgn0022710.
Homophila reports that CG9210 is a close match (5e-21) to human gene CORD6;GUC2D;GUCY2D;LCA1 (NP_000171), a gene associated with Cone-rod dystrophy 6, 601777(3);Leber congenital amaurosis I, 204000 (3).
VDRC has 2 RNAi stocks for FBgn0022710 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain186 ± 74 of 4 1.90Up
Head244 ± 84 of 4 2.50Up
Eye899 ± 344 of 4 9.22Up
Thoracicoabdominal ganglion148 ± 34 of 4 1.50Up
Salivary gland661 ± 744 of 4 6.78Up
Crop462 ± 94 of 4 4.70Up
Midgut299 ± 84 of 4 3.10Up
Tubule623 ± 494 of 4 6.40Up
Hindgut482 ± 114 of 4 4.90Up
Heart196 ± 54 of 4 2.02Up
Fat body212 ± 234 of 4 2.18Up
Ovary38 ± 04 of 4 0.40Down
Testis19 ± 24 of 4 0.20Down
Male accessory glands82 ± 24 of 4 0.80Down
Virgin spermatheca199 ± 44 of 4 2.04Up
Mated spermatheca213 ± 194 of 4 2.19Up
Adult carcass137 ± 104 of 4 1.40Up
Larval CNS69 ± 24 of 4 0.71Down
Larval Salivary gland26 ± 24 of 4 0.28Down
Larval midgut199 ± 64 of 4 2.05Up
Larval tubule1328 ± 314 of 413.60Up
Larval hindgut287 ± 24 of 4 2.95Up
Larval fat body32 ± 14 of 4 0.30Down
Larval trachea86 ± 234 of 4 0.89None
Larval carcass63 ± 134 of 4 0.65None
S2 cells (growing)5 ± 04 of 4 0.05Down
Whole fly97 ± 44 of 4

Looking for FBgn0022710. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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