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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0022893 through 18771 annotations produced 1 hits



Decondensation factor 31 (Df31):

Annotation Number : CG2207
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0022893
Gbrowse : chr2L:21626856-21629928 (-) // 100.0 //
Probeset : 1641153_a_at
Accessions : protein= NP_001027388; /// NP_523614; /// NP_724350;, nucleotide= NM_001032217; /// NM_078890; /// NM_165388;
Pathway : 0000785 // chromatin // inferred from direct assay
Interpro : 0042393 // histone binding // inferred from direct assay
FlyMine data for FBgn0022893.
BDGP gene expression has embryonic in situ data for Df31: 10 pix of staining in 7 body parts.
BioGrid reports that CG2207 interacts with CG5501 CG32654 CG8385 CG9506 CG9511 CG9951 .
TRiP has 1 RNAi stocks for FBgn0022893 available for purchase.
VDRC has 2 RNAi stocks for FBgn0022893 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain558 234 of 4 0.30Down
Head384 164 of 4 0.20Down
Eye286 174 of 4 0.16Down
Thoracicoabdominal ganglion290 124 of 4 0.20Down
Salivary gland145 114 of 4 0.08Down
Crop939 324 of 4 0.50Down
Midgut292 134 of 4 0.20Down
Tubule139 234 of 4 0.10Down
Hindgut501 174 of 4 0.30Down
Heart195 104 of 4 0.11Down
Fat body158 194 of 4 0.09Down
Ovary2556 574 of 4 1.40Up
Testis101 34 of 4 0.10Down
Male accessory glands92 34 of 4 0.10Down
Virgin spermatheca214 224 of 4 0.12Down
Mated spermatheca224 174 of 4 0.13Down
Adult carcass241 204 of 4 0.10Down
Larval CNS2676 1304 of 4 1.50Up
Larval Salivary gland922 644 of 4 0.52Down
Larval midgut431 384 of 4 0.24Down
Larval tubule352 354 of 4 0.20Down
Larval hindgut1787 374 of 4 1.00None
Larval fat body920 804 of 4 0.50Down
Larval trachea2414 1724 of 4 1.36Up
Larval carcass1624 344 of 4 0.91None
S2 cells (growing)2573 164 of 4 1.45Up
Whole fly1779 814 of 4

Looking for FBgn0022893. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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