Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0023097 through 18771 annotations produced 1 hits



bonus (bon):

Annotation Number : CG5206
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023097
Gbrowse : chr3R:16418884-16438264 (+) // 100.0 //
Probeset : 1626239_at
Accessions : protein= NP_001163665; /// NP_524724;, nucleotide= NM_001170194; /// NM_079985;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or stru
Interpro : 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0005515 // protein
FlyMine data for FBgn0023097.
BioGrid reports that CG5206 interacts with CG4059 .
TRiP has 2 RNAi stocks for FBgn0023097 available for purchase.
VDRC has 3 RNAi stocks for FBgn0023097 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain539 84 of 4 3.80Up
Head208 64 of 4 1.50Up
Eye234 104 of 4 1.66Up
Thoracicoabdominal ganglion587 214 of 4 4.20Up
Salivary gland183 204 of 4 1.30None
Crop213 94 of 4 1.50Up
Midgut97 64 of 4 0.70Down
Tubule115 24 of 4 0.80Down
Hindgut161 24 of 4 1.10Up
Heart114 44 of 4 0.81Down
Fat body92 44 of 4 0.65Down
Ovary276 34 of 4 2.00Up
Testis22 14 of 4 0.20Down
Male accessory glands133 44 of 4 0.90None
Virgin spermatheca113 74 of 4 0.80Down
Mated spermatheca128 84 of 4 0.91None
Adult carcass127 94 of 4 0.90None
Larval CNS714 294 of 4 5.07Up
Larval Salivary gland276 84 of 4 1.96Up
Larval midgut121 34 of 4 0.86Down
Larval tubule166 24 of 4 1.20Up
Larval hindgut174 94 of 4 1.24Up
Larval fat body81 74 of 4 0.60Down
Larval trachea305 134 of 4 2.17Up
Larval carcass200 114 of 4 1.42Up
S2 cells (growing)227 44 of 4 1.61Up
Whole fly141 64 of 4

Looking for FBgn0023097. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime