FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0023171 through 18771 annotations produced 1 hits

ribonuclease H1 (rnh1):

Annotation Number : CG8729
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023171
Gbrowse : chr2R:3818529-3819891 (-) // 100.0 //
Probeset : 1624030_at
Accessions : protein= NP_477315; /// NP_995777;, nucleotide= NM_057967; /// NM_206055;
Interpro : 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred
FlyMine data for FBgn0023171.
VDRC has 3 RNAi stocks for FBgn0023171 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	67 ± 3	4 of 4	0.90	None
Head	35 ± 2	4 of 4	0.50	Down
Eye	44 ± 2	4 of 4	0.62	Down
Thoracicoabdominal ganglion	64 ± 2	4 of 4	0.90	None
Salivary gland	121 ± 4	4 of 4	1.69	Up
Crop	48 ± 4	4 of 4	0.70	Down
Midgut	71 ± 3	4 of 4	1.00	None
Tubule	47 ± 3	4 of 4	0.70	Down
Hindgut	44 ± 1	4 of 4	0.60	Down
Heart	40 ± 2	4 of 4	0.56	Down
Fat body	25 ± 6	4 of 4	0.35	Down
Ovary	102 ± 2	4 of 4	1.40	Up
Testis	179 ± 7	4 of 4	2.50	Up
Male accessory glands	66 ± 2	4 of 4	0.90	None
Virgin spermatheca	20 ± 2	4 of 4	0.29	Down
Mated spermatheca	30 ± 2	4 of 4	0.42	Down
Adult carcass	24 ± 2	2 of 4	0.30	Down
Larval CNS	108 ± 9	4 of 4	1.51	Up
Larval Salivary gland	83 ± 5	4 of 4	1.15	None
Larval midgut	36 ± 2	4 of 4	0.50	Down
Larval tubule	49 ± 3	4 of 4	0.70	Down
Larval hindgut	47 ± 4	4 of 4	0.66	Down
Larval fat body	89 ± 9	4 of 4	1.20	None
Larval trachea	71 ± 8	4 of 4	0.99	None
Larval carcass	23 ± 2	4 of 4	0.33	Down
S2 cells (growing)	165 ± 6	4 of 4	2.31	Up
Whole fly	71 ± 4	4 of 4

Looking for FBgn0023171. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720