FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0023212 through 18771 annotations produced 1 hits

d-elongin B (Elongin-B):

Annotation Number : CG4204
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023212
Gbrowse : chr3R:16403779-16405593 (-) // 100.0 //
Probeset : 1631342_at
Accessions : protein= NP_524416;, nucleotide= NM_079692;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay /// 0008023 // transcription elongation factor c
Interpro : 0003711 // transcription elongation regulator activity // inferred from sequence or structural similarity /// 0005515 //
FlyMine data for FBgn0023212.
BDGP gene expression has embryonic in situ data for Elongin-B: 18 pix of staining in 15 body parts.
BioGrid reports that CG4204 interacts with CG9291 CG6380 .
VDRC has 3 RNAi stocks for FBgn0023212 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	643 ± 25	4 of 4	1.10	None
Head	899 ± 38	4 of 4	1.50	Up
Eye	825 ± 10	4 of 4	1.39	Up
Thoracicoabdominal ganglion	628 ± 24	4 of 4	1.10	None
Salivary gland	470 ± 12	4 of 4	0.79	Down
Crop	931 ± 33	4 of 4	1.60	Up
Midgut	612 ± 8	4 of 4	1.00	None
Tubule	335 ± 1	4 of 4	0.60	Down
Hindgut	688 ± 11	4 of 4	1.20	Up
Heart	880 ± 10	4 of 4	1.48	Up
Fat body	2142 ± 43	4 of 4	3.60	Up
Ovary	731 ± 10	4 of 4	1.20	Up
Testis	480 ± 9	4 of 4	0.80	Down
Male accessory glands	490 ± 12	4 of 4	0.80	Down
Virgin spermatheca	2029 ± 110	4 of 4	3.41	Up
Mated spermatheca	2107 ± 26	4 of 4	3.54	Up
Adult carcass	954 ± 72	4 of 4	1.60	Up
Larval CNS	705 ± 19	4 of 4	1.18	Up
Larval Salivary gland	795 ± 16	4 of 4	1.33	Up
Larval midgut	413 ± 9	4 of 4	0.69	Down
Larval tubule	650 ± 16	4 of 4	1.10	Up
Larval hindgut	525 ± 10	4 of 4	0.88	Down
Larval fat body	852 ± 41	4 of 4	1.40	Up
Larval trachea	534 ± 32	4 of 4	0.90	Down
Larval carcass	664 ± 31	4 of 4	1.12	None
S2 cells (growing)	653 ± 18	4 of 4	1.10	None
Whole fly	596 ± 14	4 of 4

Looking for FBgn0023212. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720