FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0023531 through 18771 annotations produced 2 hits

(CG32809):

Annotation Number : CG32809
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023531
Gbrowse : chrX:1574041-1586580 (-) // 100.0 //
Probeset : 1629389_a_at
Accessions : protein= NP_569934; /// NP_726755;, nucleotide= NM_130578; /// NM_166899;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0023531.
BDGP gene expression has embryonic in situ data for EG:171E4.3: 13 pix of staining in 7 body parts.
BioGrid reports that CG32809 interacts with CG5446 CG7919 CG9293 CG9749 CG3727 CG6251 CG6856 CG7371 CG7933 .
TRiP has 1 RNAi stocks for FBgn0023531 available for purchase.
VDRC has 4 RNAi stocks for FBgn0023531 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	123 ± 5	4 of 4	13.40	Up
Head	12 ± 4	0 of 4	1.30	None
Eye	18 ± 2	2 of 4	1.95	Up
Thoracicoabdominal ganglion	59 ± 5	4 of 4	6.40	Up
Salivary gland	12 ± 3	0 of 4	1.36	None
Crop	8 ± 2	0 of 4	0.90	None
Midgut	2 ± 0	0 of 4	0.20	None
Tubule	1 ± 0	0 of 4	0.20	Down
Hindgut	6 ± 1	0 of 4	0.70	None
Heart	6 ± 2	0 of 4	0.68	None
Fat body	7 ± 3	0 of 4	0.85	None
Ovary	8 ± 1	0 of 4	0.90	None
Testis	6 ± 0	0 of 4	0.60	None
Male accessory glands	5 ± 3	0 of 4	0.60	None
Virgin spermatheca	2 ± 0	0 of 4	0.26	None
Mated spermatheca	3 ± 0	0 of 4	0.33	None
Adult carcass	8 ± 2	0 of 4	1.00	None
Larval CNS	12 ± 3	0 of 4	1.35	None
Larval Salivary gland	4 ± 1	0 of 4	0.52	None
Larval midgut	3 ± 1	0 of 4	0.42	None
Larval tubule	3 ± 1	0 of 4	0.40	None
Larval hindgut	2 ± 0	0 of 4	0.23	None
Larval fat body	3 ± 0	0 of 4	0.30	None
Larval trachea	2 ± 2	0 of 4	0.30	None
Larval carcass	15 ± 2	0 of 4	1.68	None
S2 cells (growing)	8 ± 2	0 of 4	0.88	None
Whole fly	9 ± 2	0 of 4

(CG32809):

Annotation Number : CG32809
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023531
Gbrowse : chrX:1569112-1586580 (-) // 100.0 //
Probeset : 1640631_at
Accessions : protein= NP_569934; /// NP_726755;, nucleotide= NM_130578; /// NM_166899;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0023531.
BDGP gene expression has embryonic in situ data for EG:171E4.3: 13 pix of staining in 7 body parts.
BioGrid reports that CG32809 interacts with CG5446 CG7919 CG9293 CG9749 CG3727 CG6251 CG6856 CG7371 CG7933 .
TRiP has 1 RNAi stocks for FBgn0023531 available for purchase.
VDRC has 4 RNAi stocks for FBgn0023531 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	238 ± 13	4 of 4	16.30	Up
Head	21 ± 3	4 of 4	1.50	None
Eye	39 ± 2	4 of 4	2.69	Up
Thoracicoabdominal ganglion	114 ± 17	4 of 4	7.80	Up
Salivary gland	26 ± 5	1 of 4	1.79	None
Crop	12 ± 2	0 of 4	0.80	None
Midgut	9 ± 0	3 of 4	0.60	Down
Tubule	7 ± 0	0 of 4	0.50	Down
Hindgut	11 ± 1	3 of 4	0.70	None
Heart	13 ± 1	3 of 4	0.94	None
Fat body	15 ± 1	4 of 4	1.02	None
Ovary	29 ± 1	4 of 4	2.00	Up
Testis	8 ± 1	2 of 4	0.60	Down
Male accessory glands	20 ± 1	2 of 4	1.40	Up
Virgin spermatheca	9 ± 1	0 of 4	0.67	Down
Mated spermatheca	11 ± 1	1 of 4	0.81	None
Adult carcass	12 ± 2	0 of 4	0.90	None
Larval CNS	64 ± 6	4 of 4	4.43	Up
Larval Salivary gland	10 ± 0	3 of 4	0.73	Down
Larval midgut	9 ± 1	0 of 4	0.63	Down
Larval tubule	5 ± 1	0 of 4	0.40	Down
Larval hindgut	7 ± 0	3 of 4	0.52	Down
Larval fat body	9 ± 0	1 of 4	0.60	Down
Larval trachea	12 ± 2	2 of 4	0.85	None
Larval carcass	7 ± 1	1 of 4	0.51	Down
S2 cells (growing)	19 ± 1	4 of 4	1.35	Up
Whole fly	14 ± 1	4 of 4

Looking for FBgn0023531. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720