FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0023537 through 18771 annotations produced 1 hits

(CG17896):

Annotation Number : CG17896
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023537
Gbrowse : chrX:384819-387527 (-) // 100.0 //
Probeset : 1624521_a_at
Accessions : protein= NP_569845; /// NP_726672;, nucleotide= NM_130489; /// NM_166844;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred fro
Interpro : 0000062 // acyl-CoA binding // inferred from sequence or structural similarity /// 0004491 // methylmalonate-semialdehyd
FlyMine data for FBgn0023537.
BDGP gene expression has embryonic in situ data for EG:171D11.1: 3 pix of staining in 2 body parts.
Homophila reports that CG17896 is a close match (1e-14) to human gene ALDH10;ALDH3A2;FALDH;SLS (NP_001026976), a gene associated with Sjogren-Larsson syndrome, 270200 (3).
BioGrid reports that CG17896 interacts with CG8548 .
VDRC has 2 RNAi stocks for FBgn0023537 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	923 ± 23	4 of 4	1.30	Up
Head	995 ± 23	4 of 4	1.40	Up
Eye	873 ± 32	4 of 4	1.19	Up
Thoracicoabdominal ganglion	1252 ± 19	4 of 4	1.70	Up
Salivary gland	1705 ± 33	4 of 4	2.32	Up
Crop	543 ± 13	4 of 4	0.70	Down
Midgut	782 ± 27	4 of 4	1.10	None
Tubule	5316 ± 261	4 of 4	7.20	Up
Hindgut	790 ± 28	4 of 4	1.10	None
Heart	1472 ± 49	4 of 4	2.00	Up
Fat body	1458 ± 167	4 of 4	1.99	Up
Ovary	573 ± 9	4 of 4	0.80	Down
Testis	76 ± 3	4 of 4	0.10	Down
Male accessory glands	712 ± 23	4 of 4	1.00	None
Virgin spermatheca	1739 ± 57	4 of 4	2.37	Up
Mated spermatheca	1485 ± 162	4 of 4	2.02	Up
Adult carcass	1304 ± 42	4 of 4	1.80	Up
Larval CNS	646 ± 87	4 of 4	0.88	None
Larval Salivary gland	2656 ± 229	4 of 4	3.62	Up
Larval midgut	1208 ± 79	4 of 4	1.65	Up
Larval tubule	2016 ± 127	4 of 4	2.70	Up
Larval hindgut	1617 ± 55	4 of 4	2.20	Up
Larval fat body	612 ± 89	4 of 4	0.80	None
Larval trachea	1311 ± 66	4 of 4	1.79	Up
Larval carcass	1164 ± 147	4 of 4	1.59	None
S2 cells (growing)	887 ± 31	4 of 4	1.21	Up
Whole fly	734 ± 27	4 of 4

Looking for FBgn0023537. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720