FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0024179 through 18771 annotations produced 1 hits

wishful thinking (wit):

Annotation Number : CG10776
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024179
Gbrowse : chr3L:4064145-4071713 (-) // 100.0 //
Probeset : 1640409_at
Accessions : protein= NP_524692;, nucleotide= NM_079953;
Pathway : 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceabl
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-trac
FlyMine data for FBgn0024179.
BDGP gene expression has embryonic in situ data for wit: 4 pix of staining in 1 body parts.
Homophila reports that CG10776 is a close match (4e-22) to human gene ACVR1B;ACVRLK4;ALK4 (NP_064733), a gene associated with Pancreatic cancer, somatic (3).
BioGrid reports that CG10776 interacts with CG11275 CG8428 .
TRiP has 2 RNAi stocks for FBgn0024179 available for purchase.
VDRC has 4 RNAi stocks for FBgn0024179 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	385 ± 8	4 of 4	5.30	Up
Head	205 ± 15	4 of 4	2.80	Up
Eye	374 ± 14	4 of 4	5.12	Up
Thoracicoabdominal ganglion	319 ± 15	4 of 4	4.40	Up
Salivary gland	279 ± 12	4 of 4	3.82	Up
Crop	212 ± 4	4 of 4	2.90	Up
Midgut	224 ± 10	4 of 4	3.10	Up
Tubule	348 ± 14	4 of 4	4.80	Up
Hindgut	66 ± 4	4 of 4	0.90	None
Heart	416 ± 26	4 of 4	5.70	Up
Fat body	392 ± 55	4 of 4	5.38	Up
Ovary	20 ± 1	4 of 4	0.30	Down
Testis	28 ± 4	4 of 4	0.40	Down
Male accessory glands	41 ± 4	4 of 4	0.60	Down
Virgin spermatheca	160 ± 11	4 of 4	2.19	Up
Mated spermatheca	301 ± 17	4 of 4	4.12	Up
Adult carcass	120 ± 5	4 of 4	1.60	Up
Larval CNS	215 ± 19	4 of 4	2.95	Up
Larval Salivary gland	12 ± 1	4 of 4	0.17	Down
Larval midgut	287 ± 20	4 of 4	3.94	Up
Larval tubule	455 ± 24	4 of 4	6.20	Up
Larval hindgut	69 ± 2	4 of 4	0.95	None
Larval fat body	145 ± 15	4 of 4	2.00	Up
Larval trachea	205 ± 22	4 of 4	2.81	Up
Larval carcass	84 ± 8	4 of 4	1.15	None
S2 cells (growing)	2 ± 1	1 of 4	0.03	Down
Whole fly	73 ± 1	4 of 4

Looking for FBgn0024179. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720