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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024189 through 18771 annotations produced 1 hits



sticks and stones (sns):

Annotation Number : CG33141
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024189
Gbrowse : chr2R:4686021-4743142 (+) // 100.0 //
Probeset : 1633648_at
Accessions : protein= NP_001036532; /// NP_788286;, nucleotide= NM_001043067; /// NM_176106;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or str
FlyMine data for FBgn0024189.
Homophila reports that CG33141 is a close match (3e-11) to human gene KIAA0992;PALLD;PNCA1 (NP_057165), a gene associated with {Pancreatic cancer, susceptibility to, 1}, 606856 (3).
BioGrid reports that CG33141 interacts with CG7570 CG3689 CG3937 CG4818 CG5440 CG5930 CG9893 CG6447 CG6478 CG7449 .
VDRC has 2 RNAi stocks for FBgn0024189 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain71 ± 34 of 413.30Up
Head11 ± 12 of 4 2.20Up
Eye8 ± 01 of 4 1.61None
Thoracicoabdominal ganglion72 ± 64 of 413.60Up
Salivary gland11 ± 10 of 4 2.08None
Crop9 ± 10 of 4 1.70None
Midgut6 ± 30 of 4 1.20None
Tubule4 ± 00 of 4 0.80Down
Hindgut6 ± 20 of 4 1.20None
Heart33 ± 14 of 4 6.18Up
Fat body6 ± 40 of 4 1.13None
Ovary2 ± 00 of 4 0.40None
Testis2 ± 00 of 4 0.50None
Male accessory glands8 ± 10 of 4 1.60None
Virgin spermatheca9 ± 10 of 4 1.76None
Mated spermatheca5 ± 10 of 4 1.08None
Adult carcass14 ± 20 of 4 2.70Up
Larval CNS20 ± 14 of 4 3.80Up
Larval Salivary gland4 ± 10 of 4 0.81None
Larval midgut6 ± 20 of 4 1.21None
Larval tubule4 ± 20 of 4 0.90None
Larval hindgut5 ± 00 of 4 1.03None
Larval fat body5 ± 10 of 4 0.90None
Larval trachea6 ± 30 of 4 1.14None
Larval carcass9 ± 10 of 4 1.73None
S2 cells (growing)4 ± 10 of 4 0.88None
Whole fly5 ± 10 of 4

Looking for FBgn0024189. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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