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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0024196 through 18771 annotations produced 1 hits



roadblock (robl):

Annotation Number : CG10751
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024196
Gbrowse : chr2R:13343978-13344641 (+) // 100.0 //
Probeset : 1625632_at
Accessions : protein= NP_523771;, nucleotide= NM_079047;
Pathway : 0005858 // axonemal dynein complex // non-traceable author statement /// 0005875 // microtubule associated complex // in
Interpro : "0016787 // hydrolase activity // inferred from electronic annotation /// 0042623 // ATPase activity
FlyMine data for FBgn0024196.
BioGrid reports that CG10751 interacts with CG13074 CG11166 CG12767 CG13458 CG31029 CG3613 CG4912 CG7727 CG3510 .
TRiP has 1 RNAi stocks for FBgn0024196 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024196 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain689 ± 214 of 4 1.30Up
Head668 ± 204 of 4 1.30Up
Eye903 ± 214 of 4 1.75Up
Thoracicoabdominal ganglion803 ± 394 of 4 1.60Up
Salivary gland1016 ± 144 of 4 1.97Up
Crop635 ± 334 of 4 1.20Up
Midgut846 ± 404 of 4 1.60Up
Tubule542 ± 244 of 4 1.10None
Hindgut779 ± 94 of 4 1.50Up
Heart595 ± 174 of 4 1.15None
Fat body329 ± 524 of 4 0.64Down
Ovary576 ± 154 of 4 1.10None
Testis557 ± 124 of 4 1.10None
Male accessory glands582 ± 564 of 4 1.10None
Virgin spermatheca466 ± 94 of 4 0.90None
Mated spermatheca677 ± 404 of 4 1.31Up
Adult carcass336 ± 284 of 4 0.70Down
Larval CNS799 ± 224 of 4 1.55Up
Larval Salivary gland1178 ± 214 of 4 2.28Up
Larval midgut712 ± 434 of 4 1.38Up
Larval tubule652 ± 74 of 4 1.30Up
Larval hindgut613 ± 204 of 4 1.19None
Larval fat body425 ± 394 of 4 0.80None
Larval trachea1186 ± 164 of 4 2.30Up
Larval carcass522 ± 184 of 4 1.01None
S2 cells (growing)938 ± 154 of 4 1.82Up
Whole fly516 ± 344 of 4

Looking for FBgn0024196. 1 entries matched from 18771, in 4 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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